KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_21387
Entry
TRIADDRAFT_21387  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K12599  antiviral helicase SKI2 [EC:5.6.2.6]
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRIADDRAFT_21387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tad03019]
    TRIADDRAFT_21387
Enzymes [BR:tad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     TRIADDRAFT_21387
Messenger RNA biogenesis [BR:tad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     TRIADDRAFT_21387
  mRNA degradation factors
   3'-5' decay
    Ski complex
     TRIADDRAFT_21387
SSDB
Motif
Pfam: DSHCT DEAD MTR4_beta-barrel ResIII Helicase_C nSTAND3
Other DBs
NCBI-GeneID: 6751234
NCBI-ProteinID: XP_002109463
JGI: 21387
UniProt: B3RPG2
LinkDB
AA seq 937 aa
ERWFFRVNINQDVDKFHSIVPNMAFTWPFELDAFQKQAIMKLEKHENVFVAAHTSAGKTV
VAEYAIALASKHVTKAIYTSPIKALSNQKFRDFKMTFGDVGLLTGDVQINPEASCLIMTT
EILRSMLYNGSDTIRDIEWVIFDEVHYINDDERGVVWEEVVILLPDHVGLILLSATVSNS
DELADWVGRTKRKQIHVISTTKRPVPLEHFLYRSPNQKTDKDLIKIFDIYYKLMGVIFRY
QSNSLREAFKRPTSTKPTPKGGKPTTKEAQIYQSLIKNLIKKDPPMVPAVVFVFSRKKCD
NLAGSLSTANLTTKDEKSKIKRFIKKSISILSDKDQKLPQVVWLCEMLQLGVAVHHSGIL
PVLKEIVEMVYQEGLVKCLFATETFAMGVNMPAKCVIFDTISKHDGNSRRRLHPGEYIQM
AGRAGRRGKDKTGTVIMLLKEEINEIDLRQMITGKPQKLQSKFRLTYGMALKVLRVENLE
VEDLMWRSFAELHKQVRKSTLEKQLLPLQTKSRSENFSCPNCISSIDLYCEVLHDYYHAN
ECLQKILLTEAQSKIKGRFVVINNDNHHNALGIVLDTKVDSKRRSFYKTFILINESEEKS
TLLKPKGSRPYSNQLFIPYGTCQYKVEDIGESDIAAISKNSSKVKVDKIMVELTGSNFKN
IDSEEHISAAMLELKRVSENNSDGLQTVLSFSDIKRFDAEFRDIKAVYDDAIARMKSSKC
VKCPHFAEHLVQARDRFVSRQRLERVKFELSKENLVLQADYKNRRELLQCLGYIDERGVV
QLKGRVACEINNCELLITELVFDNILNPMAPEEIAALLSCIVFQQGVEVIRGKAKELDKL
EAEYNIDIYEKYEDMINFGLVEVVHDWAKGEPFAKIMTLTDVSEGVIVRCIQRLDSACME
VKTAARIIGDPVLFDKMIEASRMIKRDICFTASLYIK
NT seq 2814 nt   +upstreamnt  +downstreamnt
gaacgatggtttttccgcgtcaacataaatcaggatgtcgataaatttcattctatagta
ccaaatatggcatttacgtggccgtttgaattagatgcattccagaagcaggctattatg
aaactagaaaagcatgaaaatgtgtttgttgcagcgcacacttcagctgggaagactgta
gttgccgaatatgcaattgctttagcatcgaagcatgttacgaaggccatatatacttct
cctataaaggctctgtcaaatcagaagtttcgcgatttcaaaatgacgtttggtgatgta
ggactattgacgggtgatgtacaaataaatcccgaagcatcttgtttaatcatgacaaca
gaaattcttcgttccatgctatacaatggttcagacactattcgcgatatagaatgggtt
atcttcgacgaagtgcattatattaacgacgatgagaggggagtcgtttgggaagaagta
gtcatattgttgcctgatcatgttggtctgatattattatctgcaacggtctcaaattcg
gatgagttagcagactgggttgggagaactaaaagaaaacaaatacatgttatcagtaca
actaaacgccctgttccccttgaacattttctatatcgttcaccaaatcaaaagacagat
aaagatttgatcaaaatctttgacatatattataaacttatgggtgtaatcttccgttat
caatccaatagcctgagagaagcttttaaacggccaacatctactaaacctacaccaaaa
ggaggtaaacctacgaccaaagaagcgcaaatataccagtcattaattaaaaatttaata
aaaaaagatcctcctatggttccagccgttgtttttgtgttctcgaggaagaaatgtgac
aatttggccggtagcttatcaactgctaatcttactactaaagatgaaaaatcaaaaata
aaacgtttcatcaagaagtcaatttcaatactaagcgataaagaccagaaacttcctcag
gtagtttggctctgtgagatgctccagctaggagtagctgtacaccatagtggaattctc
cctgtgttaaaggagatagtagaaatggtatatcaggaaggcctcgtaaagtgcctattt
gcgacggaaacttttgctatgggggtcaatatgcccgctaagtgcgttatatttgacaca
atatctaagcatgacggcaatagtcgtcgacgcctgcatcctggtgaatatattcaaatg
gcaggaagagcaggccgaagaggcaaagataaaaccggaacagttatcatgttattaaag
gaagaaataaatgagattgaccttcggcaaatgataactggaaaaccgcaaaaattgcag
tctaaatttagattaacttatggtatggcactaaaagtattacgagtagagaatctagaa
gtagaggatttaatgtggcgtagttttgcggaattgcacaaacaagtcagaaaatcgaca
ctagaaaaacagttgttgccgttacaaactaaatcaagatcggaaaactttagctgtcct
aattgtattagcagtatcgatttatattgcgaagtgttacatgactattatcatgctaat
gaatgcttacaaaaaatcttattaactgaagcacaatcgaagattaaaggaagattcgtt
gtaataaataatgataatcaccacaacgcgttgggcattgttttagatactaaagtggac
tcgaaacgaagatctttttacaagacattcattctaatcaatgaatctgaagaaaaatca
actctactgaaaccgaaagggagtagaccttactctaaccaattattcataccatacggc
acgtgtcaatataaagttgaagatattggcgaatctgatatcgctgcgatatctaaaaat
tcctctaaagttaaagttgataaaattatggttgaacttactgggtcgaacttcaagaac
attgacagcgaagagcacattagtgcagcaatgctggaattaaaaagagtatccgaaaat
aattcagacggattgcaaactgtactctcgtttagtgatatcaaaagatttgatgctgaa
tttagagatattaaagcagtctatgacgatgctatagctagaatgaagtcttcgaaatgt
gtgaaatgccctcattttgccgaacatcttgtccaggctcgagaccgatttgtaagtcgt
caaagactcgaaagggtaaaattcgagttatcaaaagaaaatttagtattgcaagccgat
tataaaaatcgtagagagctgttacaatgcttagggtacattgatgaaaggggtgttgtg
caattaaaaggacgagtggcttgtgaaattaataattgtgaattgcttattacggagtta
gttttcgataatatcttaaatcctatggcaccagaagagattgcagctttgctgtcatgt
attgtatttcaacagggagtggaagtcattagaggaaaagcaaaagaattggataaactc
gaagccgaatataacatagatatttatgaaaagtatgaagacatgattaatttcggtctt
gtagaagtagtgcatgactgggctaaaggagagccattcgcgaaaatcatgaccttaacg
gatgtatcagaaggtgtcatagtgcgatgtatacaacgcttagactcagcatgtatggag
gtaaaaacagctgcaagaattattggcgatcctgttttattcgataaaatgattgaagct
tcaagaatgattaaacgggatatttgttttacagctagtttatacatcaaataa

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