Trichoplax adhaerens (placozoan): TRIADDRAFT_51339
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Entry
TRIADDRAFT_51339 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_51339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_51339
03036 Chromosome and associated proteins [BR:
tad03036
]
TRIADDRAFT_51339
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIADDRAFT_51339
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
TRIADDRAFT_51339
mRNA degradation factors
5'-3' decay
Decapping complex
TRIADDRAFT_51339
Chromosome and associated proteins [BR:
tad03036
]
Eukaryotic type
Gene silencing
piRNA pathway
TRIADDRAFT_51339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
6749657
NCBI-ProteinID:
XP_002107635
JGI:
51339
UniProt:
B3RIJ4
LinkDB
All DBs
AA seq
418 aa
AA seq
DB search
MATATNRTPSAATNNVRNANSKKTEDWKQNLHRPAPDKRIRTSDVTNTKGNDFEDYCLKR
DLLIGIFEKGFEKPSPIQEESIPVAVSGKDIIARAKNGTGKTGAYLIPLLQLTDPDKNVV
QSIVLVPTRELALQTSQICKELGKHMQINVMVTTGGTNLRDDIMRLNDPVHVMVATPGRM
FDLARRNIADLNNCKLLVLDEADKLLSMDSNEYLEGLIRLLPDRRQILMYSATFPVSVCS
FKDRHLHNAFEINLMDDLTLKGITQYYAHVHERQKVHCLNTLFAKRVELLAKKITQLGYS
CFYIHAQMSQHDRNRVFHDFRRGECRNLVCTDLFTRGIDIQAVNVVINFDFPISSETYLH
RIGRSGRFGHLGLAINLVTPNDRRSLYQIEEELATTIKAIPQNVDARLYVAEFQMSDQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctactgctaccaatcgtactcctagtgcggcaaccaacaacgttaggaatgccaat
tcgaaaaaaactgaagactggaaacaaaatctacatcgtccagctcccgacaaacgtatc
agaactagtgatgttacaaatacgaaaggcaatgattttgaagattactgcctcaagcgt
gacctattaatcggaatctttgagaaaggatttgaaaaaccgtcgccaattcaggaagaa
agtattcccgtcgctgtttctggtaaagatattatagcgagagcaaagaatgggacaggc
aagactggtgcttacttgattccattattacagctaactgatccagacaagaacgtcgtt
caatcgattgtcttagttccgactcgtgaattagccttgcaaactagtcaaatttgtaaa
gaacttggtaaacatatgcaaataaatgttatggtaacaactggtggtacaaatctccgc
gatgatattatgcgtttaaatgatccagtccatgttatggttgcaactcctgggcgcatg
ttcgatttagcccgtagaaatattgctgatttaaataactgtaaacttctggtcctggat
gaagcagataagctgctatctatggattctaatgaatacttggaaggattaattagatta
ctccccgatagaagacagatacttatgtattcagctactttcccagtttcagtatgttcc
tttaaggatcgacacttacataatgctttcgagattaatcttatggacgacctaacattg
aaaggtattacacagtattacgctcatgttcatgaacgtcagaaagtccactgcctgaat
acattattcgcaaagcgagtagaactacttgcgaaaaagattacacaattaggatactct
tgtttttatattcatgctcaaatgagtcaacacgatagaaatcgggtttttcacgatttc
cgtcgtggagaatgccgtaaccttgtatgcactgatctttttacaaggggtattgatatt
caagctgtaaatgtagttattaatttcgacttccctataagttcggaaacttatttacac
agaattggacgatcgggacgatttggtcacttaggattagcaattaatcttgtaacccca
aacgatcgacgtagtctttatcaaatagaagaagagcttgcaacgacaattaaagctata
ccacaaaatgtcgatgcgcgtttgtatgtagctgaatttcaaatgtcagaccagtaa
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