KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_57566
Entry
TRIADDRAFT_57566  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TRIADDRAFT_57566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tad03400]
    TRIADDRAFT_57566
Enzymes [BR:tad01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TRIADDRAFT_57566
DNA repair and recombination proteins [BR:tad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     TRIADDRAFT_57566
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C zf-CCHH RNA_ligase
Other DBs
NCBI-GeneID: 6754999
NCBI-ProteinID: XP_002113418
JGI: 57566
UniProt: B3RZT0
LinkDB
AA seq 823 aa
MPIEFLAEYDRSGRASCKGCKQKLEKKALRIAKVVENPFGDTGETMKQWHHPKCIFNSFI
RARPATKIIQTVADIDGYDDLEDDDQESVSQMITDCLKERGNKQSKKKMVQQSIPFAKAY
HSSTSNNNNSQDDNSFQLFTSLCDKIGNVGSYLAKTKVVADLLKMGSNGNGYEGDIYLLM
KLLLPGIEKRVYNLQSRQLIKLFSQIFVCDYDEMLEDLDKGDVAETITDFFANNTAVAPL
NRSLLTMQEVDDLLDELSNVTKEDMQLKVLKKIARRCTTEDLRYIIRLIKHDLRINAGSR
HILDALDKNAHAAYQASSDLRDVVDRCLARKTDRNNDDDDGAPKLKRDLSIRASLMTPVR
PMLAEACKSINTAIKKCPKGMFAEIKYDGERVQIHKNGQQFEYYSRSLKQVMPHKVKDIK
QYLPQACPHGNSIILDSEVLLVDKTGKPLPFGTLGVHKKQNFSDATVCLFIFDCLHFNGK
DLMQTRKILESNVQEIPGRIMLSEKKLVQKENELTGLVSRVIREGLEGLVLKDVESVYEP
GKRHWLKIKKDYLAEGSMADSADLVVLGAYYGTGNKGGVMSVFLMGTYDERSGRWRTVAK
CGNGHDDKTLDKINKELSVVKISKDFSKVPGWLNVHRSLVPDFIVTDPKTAPVWEITGAE
FSQSTVHTADGISIRFPRVTRIRDDKDWTNATNLDRLKTLYENSKDASDIADSLLGVKKE
VDDEGECSSSSSPDKTVTRKRKVEELEKEKTTIADNKVISKIPCKYGPNCYRKNGEHLAN
YSHNKENGNSSPNACGSQIKQDDSSKYMTASEFWDFYKKSKQS
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgcccattgaatttctagctgaatatgatcgtagcggtcgtgccagttgtaaaggatgc
aaacaaaaactagaaaagaaagctttacgtattgctaaagttgtagaaaacccttttgga
gatacaggggagaccatgaaacaatggcatcacccgaaatgcatctttaattccttcata
agagcaagaccagctacaaaaattattcaaactgtggcagatattgatggatacgatgac
ttggaggatgatgatcaagaatcagtgtcacaaatgataaccgattgcttgaaagagcgt
ggtaataaacaatcgaaaaagaaaatggttcaacaatctataccctttgctaaagcgtat
catagctcaacttccaataataacaatagccaagatgacaattccttccagctctttaca
agtttgtgcgataaaatcggcaacgttggtagttatttagccaagactaaagttgttgca
gatctgctaaaaatgggcagtaacggaaatggctatgaaggagatatttatttacttatg
aagcttttactacctggtattgaaaaacgtgtttacaacttgcagagcagacaattaatc
aagctttttagccagatatttgtatgtgattacgacgaaatgctcgaggatttagataag
ggagacgttgccgaaacaattacggatttctttgccaacaatacggctgtagcgccgtta
aatcgaagtcttttaactatgcaagaggttgacgatctattagatgaattgagtaacgta
actaaagaagatatgcaacttaaagtgttgaaaaaaattgcaagaagatgtactacagaa
gacttaaggtacattattaggcttatcaaacatgatctaagaatcaacgctggctctagg
catatattggatgctcttgataagaatgctcatgcagcatatcaagcttccagtgattta
cgtgatgttgtagatcgatgtttagcacgaaagactgataggaataatgatgatgacgat
ggagcaccaaaattgaaacgagatcttagtatacgcgcttctttaatgactcctgtcagg
ccgatgttggcagaagcatgtaaatcgatcaatactgcaatcaaaaaatgtccaaaagga
atgtttgccgagatcaaatatgatggcgaaagagtacagattcacaaaaacggacaacaa
tttgaatattacagtcgaagcttgaaacaagttatgccacacaaggttaaggacataaaa
caatatctgccgcaagcatgtccgcatggtaatagtatcatcctggacagtgaggtatta
ctagtcgataaaactggcaagcctttaccatttgggactcttggagttcacaagaaacaa
aatttttcggacgctaccgtttgcttgtttattttcgactgcctgcatttcaatggtaaa
gatttgatgcaaacacggaagatattagaaagcaatgtccaggagattcctggtcggata
atgttatcagagaagaaacttgttcaaaaggaaaatgaacttacgggattagtttcacga
gtaattagagagggcttggaaggtcttgtattaaaagatgtggagagcgtatatgaacca
ggaaagagacattggctaaagataaaaaaggattacctagctgaaggaagtatggcagat
agtgccgatcttgttgtgcttggagcatactacggtaccggaaataaaggtggagttatg
tcggtcttcttgatgggtacatatgatgaaagatctggtcgttggcgtaccgttgccaaa
tgcggtaatggccatgatgacaaaactttggataaaattaacaaagaactaagcgttgtt
aaaataagcaaggatttttcgaaggttcctggctggttaaatgttcatcgtagcttggtt
cctgattttattgtaactgatcccaagacagcgcccgtatgggaaattactggtgctgaa
tttagtcagtctactgttcatacagctgacggtatttctattcgctttccacgagttacg
aggattcgcgatgataaagattggacaaatgctaccaatttagatcgcttaaagacgttg
tacgaaaattccaaagatgcttcagatattgcagattctttacttggtgttaagaaagaa
gtggatgatgaaggagaatgcagtagcagtagtagtcccgataaaacggttaccagaaag
cgtaaagtagaagagttagagaaagaaaaaactactatagctgataataaggtgatatct
aaaataccttgcaagtatggtcctaattgctataggaagaatggtgaacatctagccaat
tacagccataataaggagaatggtaatagttctccaaatgcctgtggatcacagattaaa
caggatgattcgtctaagtatatgaccgcatcagaattttgggacttttataagaaatcg
aaacaatcttaa

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