Triticum aestivum (bread wheat): 123147247
Help
Entry
123147247 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123147247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123147247
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123147247
Spliceosome [BR:
taes03041
]
Complex A
U2 snRNP components
U2 related factors
123147247
Complex B
123147247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
123147247
NCBI-ProteinID:
XP_044422428
LinkDB
All DBs
Position
7A:411802690..411807270
Genome browser
AA seq
1063 aa
AA seq
DB search
MSSGDDDRVTVSRHHQRDKDKDRDHSSSRRHRDKDRPSSRHHRDDRDGERERDRDRDRHQ
RDKERDREERKARERAEKEREKEEKREKEREREREREREEREMEKERERARRREERDREK
EKSRRREAVDEEENEDRDRDRKHRRRSLHRHHHRDVEPEETPLTREEEEDAEEVERRRQK
KEEDMEAEQQRLDDEMERRRRRVKEWQEKKRREQQQEDGASGGAAAIEADGGGKSGKKWT
LDGEESDEEDVKKLEENAGTGAMDVDLPSMDNGSNSGAGLEEDEIDPLDAFMDSMVLPVV
AKLESATTATESVLADNAGGLNDKSVKDATSNEDKKRQMMAIGRIMQGDDSDSDYDDANN
GEAGSDDEDDAEFIKRVKKTKAEKLVIVDHSKIDYQPFRKNFYIEVKDIKNMPAEEAAAY
RKLLELKVHGKDVPKPIKTWIQSGLTSKLLDTIKKLGFEKPMPIQAQALPVIMSGRDCIG
VAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIYSDIKKFSKVLGI
NCVPIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVLDEADRM
FDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQMGGRSVVNKDIT
QLVEVRPESERFFRLLELLGEWFANGKILVFVQSQDKCDSLLKELFQHGYPCLSLHGGKD
QNDRESTLADFKSNVCSLLIATSVAARGLDVKDLELVVNYDVTNHYEDYVHRVGRTGRAG
RKGCAVTFISEEEERYAPDLVKALELSEQAVPEDLKALADRFMSKVKQGTEQAHGTGYGG
SGFKFNEEEEEARKSAKRAQAREYGYEEDKSDSDSDDEGGVRKQGGDVAAQAIAAAQAAA
ALAAARATSNAQQQVPATTAGSLLPLPVVPSQQNNEATQRALDAAYNLQKNLARIQAHAV
PEHYEAELEINDFPQNARWKITHKETLVPIQEWTGAAITTRGTFIPQGKIVGANERKLYL
FIEGPNESSVKKAKAELKRVLEDCANQALNLPGSAQTGKYSVL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggcgacgatgaccgcgtcaccgtctccaggcaccaccagcgggacaaggac
aaggaccgcgaccactcctcctctcgccgccaccgcgacaaggaccgcccctcctctcgc
caccaccgcgacgacagggacggtgagcgggagcgggaccgagatcgcgaccgccaccaa
agagacaaggagcgggatcgagaggagcggaaggcgcgggagcgggcggagaaggagcgc
gagaaggaggagaagagggagaaggaaagggaaagggaaagggagagggagagggaggag
agggagatggagaaggagagagagcgggcgcgtcgtcgcgaggagcgggatagggagaag
gagaagtcgaggaggcgggaggcggtcgatgaggaggagaacgaagatcgtgaccgcgac
cgcaagcaccgccgccggtccttgcaccggcaccaccaccgtgatgtggagccagaggag
acaccgctgacaagggaggaggaggaggatgcggaggaggtggagagacggcggcagaag
aaggaggaagacatggaggctgagcagcagcggcttgatgacgagatggagcggcgccgc
cgccgtgttaaggagtggcaggagaagaagcgccgtgagcagcagcaggaggatggtgcc
agtggtggtgcagctgccattgaggctgatggtggaggcaagtctgggaagaagtggacc
ttggatggtgaggagtcggatgaggaggatgtgaagaagttggaggagaatgctggcact
ggtgccatggatgttgacctaccaagcatggataatggcagtaacagcggggctggtttg
gaagaggatgagattgatcccctcgacgcgtttatggactccatggtgttgccagtggtt
gcaaagctcgagagtgccacaacagcgacggagagcgtgcttgctgacaatgcaggtggt
ttgaatgacaagagtgtgaaggatgccacaagtaatgaggataagaaaagacagatgatg
gcaattggaagaattatgcaaggggatgactctgactcagattatgacgatgctaataat
ggcgaggctggatcagatgatgaggatgatgcagagttcataaaacgtgtcaagaagacg
aaggcagagaagttggttattgttgaccattccaagattgattaccaaccattccggaag
aatttctatattgaggtgaaagacataaaaaatatgccagccgaggaagcggcggcctac
cggaagctgttggagctcaaggtgcacgggaaagacgttccgaagccaataaagacatgg
atccagagtggtctgacaagtaagctacttgacactatcaagaagcttggttttgagaaa
ccgatgcctatacaagcacaggcgttgccagtcataatgagtggacgtgattgtataggg
gttgcaaagactggatctgggaagactctagcatttgtcttgcccatgctgaggcatgtc
aaagatcagccgcctgttgtgcctggggatggccctattgggcttattatggctcctacg
agagagcttgtggtgcaaatatattcagacataaaaaagttctccaaggtgcttggcatc
aactgtgttcctatatacggaggttctggggttgcccagcagatcagtgaactgaagagg
ggtgctgaaattgttgtttgtacaccaggcaggatgattgatatcctttgcactagcagt
ggcaagattactaaccttcgaagagtgactttcttggtgctagatgaagctgataggatg
tttgacatgggttttgagcctcagattactcgaatcgttcagaacacccgtccggatagg
cagactgtccttttctctgccacttttccacggcaggtggagatactggcacgtaaagtg
ctgacaaagcctgttgagattcagatgggtgggaggagcgtcgtgaacaaagatatcaca
caactggtggaagtgcgaccagaaagcgagaggttctttaggctgttggaattgcttggg
gagtggtttgcaaacggaaaaattcttgtttttgtacagtcgcaagataagtgtgattct
ctactgaaagagctgttccagcacggatacccatgtttgtctctacatggtggaaaggat
caaaatgaccgtgaatcaactcttgctgatttcaagagtaatgtatgcagcttgctgatt
gctaccagtgttgctgcaaggggtttagatgtgaaagatcttgagcttgttgtcaattat
gatgtaactaatcattatgaggactatgttcatcgggtcgggcgaacgggtcgcgctggt
aggaagggctgtgctgtgacttttatttctgaggaagaggaacgctatgcaccagacctt
gttaaggctttggagctatctgaacaggccgttccagaggacctgaaagccttagcggat
cgatttatgtcaaaggtcaagcagggaacagagcaggcccatggaacgggctatggtgga
agtggtttcaagttcaatgaagaagaggaggaagcacggaaatctgcaaaaagggcgcag
gcaagggaatatggatatgaggaggacaagtcagattcagattctgacgatgaagggggt
gtgcgtaaacagggaggtgatgttgcagcacaagctattgctgctgctcaagctgccgct
gctttggctgctgccagggcaactagtaatgcccagcagcaagtaccagccacaacggct
ggctccttgcttcctctgccggtcgtacctagccaacaaaacaatgaagccacacaacga
gcacttgatgctgcatacaacttacagaaaaatttggcaaggatacaggcccatgcagtt
ccagaacactatgaagcggagcttgagattaatgatttcccacaaaatgctcgctggaag
atcactcacaaagagacattggttcccattcaggaatggactggagcggcaattactaca
aggggaaccttcattcctcaaggcaaaattgttggtgctaacgagcgcaagctgtacctg
tttattgagggccccaatgagtcttccgtcaagaaggccaaagcagaattgaagcgtgtc
ctcgaggattgtgccaaccaggcactgaatcttccaggttctgctcaaaccggaaagtat
tctgttctttga
DBGET
integrated database retrieval system
