Candidatus Nitrosotenuis cloacae: SU86_000565
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Entry
SU86_000565 CDS
T03883
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tah
Candidatus Nitrosotenuis cloacae
Pathway
tah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SU86_000565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tah03400
]
SU86_000565
DNA repair and recombination proteins [BR:
tah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SU86_000565
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SU86_000565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
P-loop_SecA
nSTAND3
AAA_30
Met_synt_B12
UvrD-helicase
AAA_33
UB2H
AAA_7
HEM4
AAA_22
ABC_tran
HIND
Motif
Other DBs
NCBI-ProteinID:
AJZ75128
UniProt:
A0A3G1AZ11
LinkDB
All DBs
Position
complement(647099..649048)
Genome browser
AA seq
649 aa
AA seq
DB search
MQVQTSYQLSSEYIPTGDQPQAIEKLVSGVQKNKIQTLLGVTGSGKTFTVANVIARTGKN
TLVISHNKTLAAQLYSELKQFFPKNNVGYFVSYYDYYQPESYIAQTDTYIEKDTEINEKI
EKMRLEATAMLLSGEPTIIVATVSCIYSLGNPKDWEEMATTIKTGMQYGRSEIIKRFVNA
RYERNDVTISPGTFRVKGDTIDVIPAYSQDVIRISLFGDEIEKIAILDTVSLKEKRKVNS
IKIFPAKHYLVANDVRSKAVKSIRDELKARLPELRELEQQRLEMRTKFDLEMIEELGYCS
GIENYSRHFDGRKPGEQAFCLIDFFGDDYLLVIDESHVTIPQLHGMYGGDYTRKKSLIEY
GFRLPSAFDNRPLKFEEFEKYIKNTIFVSATPSVYEREKSYQIAEQLVRPTGLVDPQVEI
RSTKNQMDDLIGEIKKKTEKNQRVLVTTLTKRMAEDLAEYLSKKEIRVRYLHAEIEGLQR
TELIRQLRLGDFDVLVGINLLREGLDIPEVALVAILDADKEGFLRNYTSLIQTFGRAARN
VDGAVILYADTITKSITSAIEETNRRRAKQLEYNSIHNITPRTIIKSIPEQVATLDDLKN
KTPHDLSREIIEIEMQMKKYAEELDFENAIACRDRLRRIQIELEKKNAR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagtacagacatcataccaattatcatctgaatacatcccaacgggggatcagcca
caggcaattgaaaaactagtcagcggcgttcagaaaaacaaaatacagacactgcttgga
gtgacgggctctggcaagacatttaccgttgcaaatgtaattgcgaggactggcaagaat
acacttgtaatatcacacaacaagactttggctgcccagctgtattctgagctaaagcag
ttctttccaaagaataatgtcggatattttgtatcatactatgactattaccagccggaa
agctacattgcgcaaactgatacctacatcgaaaaggacactgaaatcaatgagaaaata
gagaaaatgagactagaggcaactgccatgctcttgtctggggagccaaccatcatagtt
gcaacagtatcttgcatctactcccttggaaacccaaaagactgggaagagatggcaacg
accataaaaacaggcatgcagtacggcagatccgagataatcaagcgatttgtcaacgca
cgatatgagcgtaatgacgttaccatatctccaggcacgtttcgggtgaaaggtgatacc
atcgatgtgattcccgcatactcgcaggatgtaatacgaatctctttgtttggagatgag
atagaaaagattgccatcctagatacggtctcactaaaagaaaagcgcaaggtaaactcg
attaaaatatttccggcaaagcattatttggttgcaaatgatgttcggtccaaggcagta
aaatcaattcgcgatgagctaaaggcccgcctgccagaactaagagagctggagcaacaa
agactagagatgcgaaccaagtttgatctggaaatgatcgaagagcttggatattgctct
ggaatagagaactattcacgccactttgatggaagaaagccaggcgagcaggcgttttgc
ttgattgacttttttggggatgattatttgctagtgatcgatgaatcacacgttaccatt
ccacaattacacggaatgtatggaggggactacacccgaaaaaaatccctaatcgaatat
gggtttaggctgccaagcgcatttgataatcgaccactaaagtttgaggaatttgaaaaa
tatatcaaaaatacaatctttgtttctgccacaccctccgtatatgagcgagaaaaatca
tatcaaatagcagagcagttggtccgcccaacaggactggtggacccacaagtagagatc
aggtcaacaaagaaccagatggatgatcttattggtgagataaaaaagaaaaccgagaaa
aaccagcgagttttggtaaccacgctaacaaaaagaatggcagaagaccttgcagaatac
ctatccaaaaaagagattcgagtcagatatttgcatgcagagattgaaggcctccaaaga
actgagctgattcgccagttgaggcttggcgactttgatgttttggttggcataaaccta
ctacgagaaggactagacattccagaggttgcccttgttgccatactggatgcggacaag
gagggctttttgcgtaattataccagcctgattcagacatttgggcgtgccgcaagaaat
gtcgatggtgccgttattttgtatgcagatacaataacaaagtccatcacatcggcaatc
gaggagacaaatcgcagacgggcaaaacaactagaatacaacagcatccacaacatcacg
ccacgaaccattatcaagtccattccagagcaggtagcaacactggatgatctcaaaaac
aagacaccgcatgatctgtcccgtgagataatagaaatagagatgcagatgaaaaaatat
gcagaggaattggactttgagaacgcgattgcctgtcgcgatagactgaggcgaattcaa
atagagttggaaaagaaaaatgcacgataa
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