Thermanaerovibrio acidaminovorans: Taci_1072
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Entry
Taci_1072 CDS
T01129
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tai
Thermanaerovibrio acidaminovorans
Pathway
tai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Taci_1072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tai03400
]
Taci_1072
Enzymes [BR:
tai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Taci_1072
DNA repair and recombination proteins [BR:
tai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Taci_1072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
CarD_TRCF_RID
UvrB_inter
ResIII
RecG_dom3_C
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ACZ19304
UniProt:
D1B5L3
LinkDB
All DBs
Position
complement(1125029..1128013)
Genome browser
AA seq
994 aa
AA seq
DB search
MIPRGIARAIGYGRLPVPDRFVVILPGWSDVVTLSSDLACLGREVSPLLPPVPLGVKEGV
QAHLLHRGRVLEDWIRLGGGLITSAAGAVLPALSPSGHFQLRKGDRCRSSLIHWISSQGY
ERVPVVWAPGQWALRGALVDLFPPGDRAIRVAFDDDLVEEIRVFSPETQRAVASLDSWEM
GGLKGGRSLTLLDVPVPFGLVVFEPGQVEIQCESAVWLWEQMREEIHSLPGAADWSSLAS
RVQGVIRVSSSQGDPSAMLERVPNFAGRLKEAEGFVLDMRSKGFRTLFLGSTRGYVEWAA
GCGMEVIRGSASEGALDLSERVLYLSEVDVAGVRPPSSPAGKPPADVLDSLISGDLMVHE
DYGVCRFLGIEMIEQGGVQQDYIALEFAQGKRLLMPTYRIARLYRYAGDPAEAELDSLKR
GRWSRSYQEAKEKAREAAERLLSAQARRHSARGIAFDPLEREMEELRSTFPYRETVDQVR
CWEEIRADMERPVPMDRLLVGDVGFGKTELALRAAFKAAMSGYQVVVVTPTTLLASQHLS
TFASRLSPFPLRVEALYRFVPRSRQEEILNDFAEGRVDILIGTHRILGDDVRARNLGLIV
LDEEHRFGVMQKERWRERFPGADVLMLSATPIPRTLQLALGGYKDISVMTTPPVDRRPVV
TVVSPWQDELVKGAVLRELSRGGQVFWVHNRIQSMHRAFLRAKALLPGVRVEMAHGRMRD
SELESLMARFVEGRLDVLLCTTIIESGLDLPRVNTIIVEDAHRMGLAQLYQLRGRVGRRS
DQAFALFLYPRGAEAGRALERLEAIGSLEELGSGFHLAMMDLSIRGGGELLGTAQHGHVS
SLSPELYFQMLEREVTRLKGGAELPPVEWGYSPSIPEWYVEDQPLRVRLYRRLFLPMDAS
ELDQLRDEMVDRFGPVPHQVEELILAARLRVLLAGLASEITIGRDQVQVRFRDSAAVPKG
LPPIWRVKGVVTVGPAGVRGLSELIEALSRWVTV
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgatcccccgggggatcgcccgggccataggatatggccggcttccggtccccgacagg
ttcgtggtgatcctccccggatggtccgatgtggtcaccctctcctccgacttggcctgc
ctgggccgggaggtgtctcccctgctgcctccggtgcccctgggggtgaaggagggagtt
caggcccacctgctccaccgggggcgggtgctggaggattggatccgtcttggggggggg
ctgatcacctccgctgctggggcggtgctgcctgccctctccccttccgggcacttccag
ctccgcaagggggaccgatgcaggtcctcgctcatacattggatatcctcccagggctac
gagcgggttccggtggtctgggccccggggcagtgggccctaaggggggccctggtggac
ctgttccccccgggggatagggccatccgggtggccttcgacgacgacctagtggaggag
atccgggtcttctcccccgagacccagcgggcggtggcctccctggactcctgggagatg
ggggggctcaaggggggaaggagcctaacccttctggacgtcccggtccccttcggcctg
gtggtcttcgagcccggccaggtggagatccagtgcgagtctgcggtctggctttgggag
cagatgagggaggagatccactcccttcccggtgcggcggactggtcctccctggcctcg
agggtgcagggggtgatccgggtctcctcctcccagggggatccctccgccatgctggag
cgggtgcccaacttcgccggacggcttaaggaggcggagggattcgtcctggacatgagg
tccaagggcttcaggaccctattcctgggcagtacccggggctacgtggagtgggccgcc
ggctgcggtatggaggtcattcggggttccgcctccgagggggcgttggacctgtccgag
agggttctgtacctctcagaggtggacgtggcgggggttcgtcccccctcgtccccggcg
ggcaagcccccggcggacgtcttggactccctcatatccggggacctcatggtccacgag
gactacggggtatgccgctttctggggatcgagatgatcgagcaggggggcgtccagcag
gactacatagcccttgagttcgcccagggaaagcggttgctgatgcccacctaccggata
gccaggctctaccgttacgcgggggatccggcggaggcggagctggactccctgaagcgg
ggtcggtggagccgcagttaccaggaggccaaggaaaaggcccgggaggcggcggagcgg
ctcctctccgcccaggccaggcgtcactccgcccggggcatcgccttcgatccactggag
agggagatggaggagctgaggtccaccttcccttaccgggagacggtggatcaggtccgg
tgctgggaggagataagggcggacatggagcggccggttcccatggaccggcttctggtg
ggggacgtgggcttcggcaagaccgagctggccctgagggccgccttcaaggccgccatg
tcgggttaccaggtggtggtggtgacccccaccaccctcctggcctctcaacacctgtcc
acctttgcgtccaggctatcccccttccccctgcgggtggaggccctctatcgcttcgtc
ccccggagtcgccaggaggagatcctgaatgacttcgcggaggggcgggtggacatcctg
ataggcacccaccggatcctgggggacgacgtccgggccaggaacctggggctcatcgtg
ctggacgaggagcataggttcggagtgatgcagaaggagaggtggagggagcgcttcccc
ggggcggacgtgctgatgctctccgccactcccatcccaaggacccttcagctggccttg
ggggggtacaaggacatatcggtgatgaccacgccaccggtggatcgacggccggtggtg
accgtggtgtccccctggcaggacgagctggtgaagggggcggtgttgagggagctcagc
cggggtgggcaggtgttctgggtgcataaccggatacagtccatgcaccgggcattcctg
cgagccaaggccctgctccccggggtccgggtggagatggcccacggcaggatgagggac
tcggagctggagtccctgatggcccgcttcgtggagggaaggctggacgtgctgctctgt
accaccataatagagagcggccttgacctgccgagggttaacaccataatagtcgaggac
gcccaccggatgggtctggcccagctctatcagctccgggggagggtgggtcgcaggtcc
gatcaggctttcgccctgttcctctacccccggggggctgaggcgggcagggccctagag
aggcttgaggccatagggtccctggaggagctgggttccggcttccacctggccatgatg
gacctgtccatccggggcggcggggagctgttgggaaccgcccagcacggacacgtatcc
agcctctctccagagctctacttccagatgctggagcgtgaggtcacaaggctcaagggg
ggagcggagctgcccccggtggagtggggctactccccctcgatccccgaatggtacgtg
gaggaccagcccctgagggtcaggctctaccgtcggctgttcctcccgatggatgcctcg
gagctggaccagctacgggatgagatggtggaccggttcggtcccgtgcctcaccaggtg
gaggagctgatcctggcggcgcgactaagggtgctcctggctgggttggcgtcggagatc
actataggtagagatcaggttcaggtccggttcagggattcggcggcggtgcccaagggg
cttcctcccatttggcgcgtcaagggtgtggtgacggtggggcccgcaggcgtccggggg
ctctcggagctgatcgaggccctgtccaggtgggttaccgtttga
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integrated database retrieval system
