Tyto alba (Barn owl): 104359664
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Entry
104359664 CDS
T07816
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tala01002
]
104359664 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tala04121
]
104359664 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tala04147
]
104359664 (USP13)
Enzymes [BR:
tala01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104359664 (USP13)
Peptidases and inhibitors [BR:
tala01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104359664 (USP13)
Ubiquitin system [BR:
tala04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104359664 (USP13)
Exosome [BR:
tala04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104359664 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
104359664
NCBI-ProteinID:
XP_042656511
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MQRAALFSGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHIERHYRKTGQCVYLHLKQRVIEKVPGASGGALPKRRNAKLFLDLETNSD
LNSDDFEYEDEVKLVIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQDPDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
MEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPPPELVRAKIPFSACL
QAFSEPNNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSVDM
PDFLDISHLRARGLQPGEEELPDIAPPIIIPDDPKDRMMNRFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVIPAFGEVASSGAAAFGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKATNSNLERALEWIFSHPELEEENEPALDMMDMEN
NANANILADTGSEGPRIKDGSGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLKV
CASERPPKDLGYIYFYHRIPS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctcttcagcggcggcgatgcgcagatggccgccggggacctgggc
gagctgctcgtcccttacatgcccacgatccgggtgcccaagtcaggggaccgggtctac
aagacggagtgcgccttctcctacgactcgcctgattcagaaggaggtctctatgtgtgc
atgaacacgtttctgggatttggaagggaacacattgaaaggcattaccggaaaacagga
cagtgtgtatatttacatctgaaacaacgtgtgatagagaaggtaccaggggcatctggc
ggagctttaccaaaaaggaggaatgctaagctatttttagatctagagacaaacagtgat
ctcaacagcgatgactttgaatatgaagatgaagtaaaactcgttatatttcctgatcac
tatgaaatctcattacccaatatagaagagttaccagcactggtgacaatagcttgtgat
gcactcctcagtgcaaaatcaccctacaggaaacaggaccctgactcctgggaagaagag
ctacaggcatctaaacatgccaaaacacttgtacagttagacaatggtgttagaattccc
cccagcggttggaaatgctcaaaatgtgacttgcgggagaatctgtggctaaacctgaca
gatggttctgtgctgtgtggaaagtggttcttcgatggcagtggggggaacgggcatgca
atggagcactacaaggagacaggttatcccctggcagtgaagctgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccagttttagatccgcatatagca
aaacatttggcacactttggaattgatatgctgcagatgcaagtgacagagaatgggcta
agagataatgatataaaacccagagtctctgaatgggaagtgattcaggaagctggtgtg
aaactcaagcccatgtatggcccaggatacactggaatgaagaacctaggaaatagctgc
tacctcaatgccgtcatgcaagccattttcagcatcccagagttccagagagcgtatgtg
ggaaaccttccacgaatatttgactactctcctcttgatccaacacaagatttcaacact
cagatggctaaactgggacatggcctcctttcaggccagtactctaagccacccatgaaa
tctgagcttattgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatct
ccccgaatgtttaaggcttttataagtaaaggccacccagaattttcctctaacagacaa
caagacgcacaggaatttttcctacatcttataaatctagtagagaggaaccctgtaggt
tcagaaaaccctagcgatgttttccggttcctggtggaagaacgcacacaatgctgccag
tccagaaaggtccgctacacagagagggtggactatatcatgcagttacctgttgccatg
gaggcagcaacaaacaaagatgaattaattgcctatgaattgaagaggcgagaagcagaa
gctgcaaggagacctccaccagagcttgtccgtgccaagatcccatttagtgcgtgtctg
caggccttttctgaaccaaacaacgtagaggatttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagacttctcgttttgcttcgtttcctgagtacttagtggtgcagata
aagaagtttaccttcggccttgattggatacccaaaaagcttgatgtttctgtagacatg
ccagatttcctagatatcagccaccttcgggccaggggtcttcagccaggagaagaggaa
cttccagacattgctcctcccattatcattcccgatgacccaaaagatcgtatgatgaac
cgttttgtggaatctctagatattgatgagtcttcagttatgcaactggcggagatgggg
tttcctttggaagcatgtcggaaagctgtgtactatacaggcaatctgggtgctgaagtc
gctttcaactggatcattgcacacatggaagaaccagactttgctgagccattggtcata
cctgcatttggagaagttgcttccagtggagcagctgcatttggagctgttgggctagat
aaccaacctcctgaagagatggttgcaattatcatttccatgggcttccaaaggaatcta
gcaattcaagcgctgaaggcaacaaacagtaatttggagcgtgcgctggaatggatcttc
agtcaccctgaactcgaggaagaaaatgagcctgctttggacatgatggatatggagaac
aatgctaatgccaatatccttgcagacacagggtcagagggacccaggatcaaagacgga
tctggaagatacgagctgtttgggttcatcagccacatgggaacatccacaatgagtggc
cactatgtttgtcatctcaaaaaagaaggaagatgggtgatctacaatgaccttaaagtc
tgtgcctcagaacgacctcccaaagacctgggctatatatatttttaccacaggatacca
agttag
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