Tyto alba (Barn owl): 104364341
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Entry
104364341 CDS
T07816
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03022
Basal transcription factors
tala03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104364341
09124 Replication and repair
03420 Nucleotide excision repair
104364341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tala03021
]
104364341
03400 DNA repair and recombination proteins [BR:
tala03400
]
104364341
Transcription machinery [BR:
tala03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104364341
DNA repair and recombination proteins [BR:
tala03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104364341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Matrix
Motif
Other DBs
NCBI-GeneID:
104364341
NCBI-ProteinID:
XP_032856855
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDIIFKAKRRRVSEHHGQVRLGMMRH
LYVVVDGSRTMDDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKNKRAEKMTDL
SGVPKKHITALKKAVDMNCGGEPSLYNSLNLAMQTLKHMPGHTSREVLVVFSSLTTCDPA
NIYDLIKSLKAVKIRVSIIGLSAEVRVCTVLAQETGGTYRVILDESHYKELLMNHVSPLP
ASSSSECSLIRMGFPQHTITALSDQDAKPSFSMAQLENNSEPVLTLGGYFCPQCRAKYCE
LPIECKICGLTLVSAPHLARSYHHLFPLDAFQEVSLEEYQGERCCLGCRGEMKDQKVYIC
KVCQNAFCLECDLFVHDTLHCCPGCIHEQHPTPMSI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaccggaacggaccaagcggtgggaaggaggctacgaaaggacatgggaa
attcttaaagaagatgaatccggatcgctgaaagcgaccatcgaggacattattttcaag
gcaaagcggagaagagtcagtgaacatcatggacaagttcgacttggaatgatgcgtcac
ctttatgtggtggttgatggatcaagaactatggacgaccaagatttaaaaccgaacaga
cttacttgcaccttgaagttgttggaatattttgttgaagagtactttgaccaaaatcct
attagtcagattggcttaattgtaaccaagaataaaagagctgaaaaaatgacagacctt
tcaggtgtcccaaaaaagcacataactgctctgaagaaagcggtggatatgaactgtggt
ggagagccatctctctataattccctaaatttggccatgcagaccttaaagcacatgcca
ggacatacaagcagagaagtgttggtagtcttcagcagtctgacaacatgtgatccagcc
aacatctatgatctaattaagtctttaaaagcagttaagatcagagtatccatcatcggc
ctaagtgcagaagttcgagtttgtacagtacttgcccaagaaactggtggaacataccgt
gttattttagatgaaagtcattataaagaactgctgatgaatcacgttagtcctctacct
gccagttcaagttctgagtgctcccttattcgaatgggttttcctcagcatactattact
gctctatctgatcaagatgcaaagccatcctttagcatggcgcaactggaaaacaacagt
gagccagttcttacactgggtggatatttctgtccccagtgcagagccaaatactgtgaa
cttccgatagaatgcaaaatctgtggtcttacattagtgtctgcacctcacctggctcgg
tcgtaccatcacttgtttcctttggatgcctttcaggaagtttcactggaagaatatcag
ggggaacggtgttgtctgggctgccggggagaaatgaaagatcaaaaagtttacatatgt
aaagtgtgtcagaatgcattttgcttggaatgcgatttgtttgttcatgatactctgcac
tgctgtcctggctgtatccatgagcagcaccctactcccatgtctatatga
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