Tyto alba (Barn owl): 104364718
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Entry
104364718 CDS
T07816
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03013
Nucleocytoplasmic transport
tala03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104364718 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
104364718 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104364718 (THOC1)
03041 Spliceosome [BR:
tala03041
]
104364718 (THOC1)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104364718 (THOC1)
Spliceosome [BR:
tala03041
]
Complex C
Other components
EJC/TREX
104364718 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104364718 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
DUF4611
Motif
Other DBs
NCBI-GeneID:
104364718
NCBI-ProteinID:
XP_042653781
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MASSARAVERRSVGAMSPPLFSLPEARLRFTTSTREALNNKSIKPLLNAFNQIPGSENEK
KCTLDQAFRVIVEEEIINKAPCENLLAIISLAISGVTEGICTASTPFVLLGDVLDCLPLD
QCDKIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLF
PLSEKSGLNLQSQFNLENVTVFNTNEHESTLGQKHNEEREEGMDVEEGEMGDDEAPTSCS
IPIDYNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLE
ELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTD
EQSLWIEDTTKAVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERSQPE
FQLGPPDSKPMRPVRKRPAPEDFLGKGSNKKILMGNEELTRLWNLCPDNMEACKSESREY
MPTLEEFFEEAIEQADPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLP
EYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENNESPEAQRDKAMTGEQIESFA
NRLGEQWKALAPYLEMKDSDIRQIESDSEDMRMRAKQLLVAWQDQEGAHATPENLITALN
KAGLSDLAESLTNDTESSS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcggcgcgcgcggtggagcgccgttccgttggagcgatgtcgccgccgctg
ttcagcctgcccgaggcgcggctccgcttcacgacatccactagggaggctctgaataat
aaaagtatcaagccattgttgaatgcgtttaaccagattcctgggagtgaaaatgaaaag
aagtgtaccttggatcaagcttttagagttattgtagaagaagaaataataaacaaagct
ccatgtgagaatctcctggcaattatttctcttgctattagtggagtcacagaaggtatc
tgtactgcatcaaccccttttgtgcttctgggggatgttctggattgcctgcctttggat
cagtgtgacaaaattttcacttttgtggagaaaaatgttgctacgtggaaatcgaataca
ttttactctgcagggaaaaattacttgctacgaatgtgcaatgacctcctaagaagatta
tctaagtcacaaaacacagtcttttgtggaagaattcagctgttcctggctagattattt
ccgctttcagaaaagtcaggacttaacttgcagagtcaatttaacctggaaaatgtcact
gttttcaataccaatgaacatgagagcactctaggacaaaagcacaatgaggagagagaa
gaaggaatggatgtagaagaaggtgaaatgggagatgatgaagcaccaacaagttgttcc
attccaatagattataacctgtatagaaaattctggtcacttcaagattattttagaaat
ccagtgcagtgctatgagaaggtctcatggaaaacttttcttaagtactcagaagaagtt
ttggctgttttcaaaagttacaaattggacgacactcaggcttcccgaaaaaagttggaa
gaactgaaaacaggaggagagcatgtatattttgcaaagttcctaactagtgaaaagctg
atggatttacagctgagtgacagtaactttcgccgtcacatcttgttgcagtatctaata
ctatttcagtatctaaagggacaggtcaaatttaaaagttcaaactatgttctaacagat
gaacagtctctttggattgaagatactacaaaagcagtttaccagcttctttcagaaaat
cctccagatggggaaagattctcgaaaatggtagagcatatattaaatactgaagaaaac
tggaactcatggaaaaatgagggctgtccaagctttgtgaaagaaagatctcagccagag
tttcagcttggacctcctgattctaagccaatgaggcctgtgagaaagaggccagctccg
gaggacttcttaggaaaaggctcaaacaaaaaaatccttatggggaatgaggaactgacc
cgcctttggaatttatgtcctgataacatggaagcttgtaaatctgagagtagggaatat
atgccaacgttggaggaattttttgaagaagctattgaacaagcagatcctgaaaacatg
gttgaaaataaatataaggctgtgaacaattctaactatggctggagagcattaagactt
ctagcacgcagaagtccccacttcttccagccaacaaaccaacaattcaagagtttacct
gagtatcttgaaaacatggtaatcaaattagccaaggagcttcctcctccttcggaagaa
ataaaaacaggcgaagatgaagatgaggaagataatgatgctttattaaaggaaaacaat
gaaagcccagaggcacaacgggacaaagccatgacgggcgaacaaattgagtcctttgcg
aacaggctgggggagcagtggaaggccttggccccctacttggaaatgaaggattccgat
atacggcagatcgagtcggacagcgaggacatgaggatgagagccaagcagctgctggtt
gcctggcaggatcaggagggcgcacatgccaccccggagaacttgatcactgcgctgaac
aaagccgggttaagtgacctcgcggaaagcctgaccaacgacaccgaaagcagcagctaa
DBGET
integrated database retrieval system
