KEGG   Terriglobus albidus: FTW19_24215
Entry
FTW19_24215       CDS       T06135                                 
Symbol
ligD
Name
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
talb  Terriglobus albidus
Pathway
talb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:talb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FTW19_24215 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:talb03400]
    FTW19_24215 (ligD)
Enzymes [BR:talb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FTW19_24215 (ligD)
DNA repair and recombination proteins [BR:talb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FTW19_24215 (ligD)
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase FAD-oxidase_C
Other DBs
NCBI-ProteinID: QEE30827
UniProt: A0A5B9EK78
LinkDB
Position
6058168..6060930
AA seq 920 aa
MATKKAAKKSGTRKATAKATAKRAPTASSAVDKQLAKYRSMRDFGITAEPAGGHKTAKLS
ERPFVIQKHAATRLHYDFRLGWNGVLKSWAVAKGPSYVVADKRLAVEVEDHPMEYGGFEG
IIPKGQYGGGTVMVWDHGTWVPQPGHDFDEGLKSGSLKFILHGEKLKGKWALIRMKGGRF
AGDTKPGAKPNWLLIKEHDDFERGPDDPPLTEAEPDSVVTGRSIEQIAAAEDHVWNSKET
STSDQPWYKQPSKAPEEAPRSPKPPGKAVKSAVSLGKLPKEELPEFLKPQLAVEAFTPPT
GSNWIHELKLDGYRIQAHIDHGKVKLFTRRGLDWTHRIRPVATALAKLPVTTAILDGELC
AVRPDGTTSFADLQASFEHGERRALTYFVFDLLHLDGHNPRDLPLLKRKAMVEKLLTQLD
HPQIQISQHLQGDANAIFQNACSLHAEGIVAKRGDAPHRATRSPEWLKLKCIRQQEFVVG
GFTLPSNAIHGVGALLLGYYNDLKQLIYAGRTGTGFDARTHTMLRDKLNALRQAKPAFQR
VPNEAQKGVLWVKPELVAQVTFTTWTADNLIRQAAFQGLREDKPAEEVRREEPTVAPSAK
QERGRMPMPQAAIKAPTQNSIAARVATKKKTTEDAAPVRLTHPDKVLDAASHLTKQQLAN
YYWAIAPYMLPHITNRPLSLVRCPEGSGKPCFFQKHVNHTLPPGITGTPVPDKKTGKIEQ
YITLSTPEALAGLAQMGVLEVHPWGSQNDDLERPDRVVIDLDPDTAISWSTLCDAAAEVR
DRLKKLGLTSFLKTTGGKGLHVVIPITPKHDYAAVKEWAHEFVLQMERNNPRLYLSKMSK
AARANHIFLDYLRNERGATAVAPFSPRAREGAHVSLPLPWTDLKLPERPVFTVVDFETWK
PRLKRDPWKEMGKVKQQLPI
NT seq 2763 nt   +upstreamnt  +downstreamnt
atggccacgaaaaaagcagcgaagaaatccggaacacgcaaagctaccgccaaggccacg
gcgaagcgcgcacctacggcctcctcagcggtcgacaaacagcttgcgaagtatcgctcc
atgcgcgactttggtatcaccgccgagcctgccggaggccacaaaaccgccaagctcagc
gaacgcccgttcgtcattcaaaagcacgccgcgacgcgcctgcactatgacttccggctc
ggctggaacggtgtgctgaagagctgggccgtagccaaagggccaagctacgtcgtcgcc
gacaaacggcttgccgttgaggtggaagaccatccgatggagtacggtggcttcgaaggc
atcattcccaagggacagtacggcggcggcaccgtcatggtctgggaccacggcacgtgg
gtgccgcagccggggcacgatttcgacgaagggctgaagagcggctcgctgaagttcatc
ctgcatggcgaaaagctgaaaggaaaatgggcgttgatccggatgaaaggcggacgcttt
gctggcgataccaagcctggcgccaagcccaactggctgctcatcaaagaacacgacgac
ttcgagcgcgggcccgatgatccgccgctcaccgaagcagagccggactcagtcgttacc
ggccgctccatcgagcagatcgccgccgccgaagaccacgtctggaacagcaaagagacc
agcaccagcgaccaaccctggtacaaacagccgtcgaaggcgcccgaggaggctcctcgc
agccccaaaccacccggcaaggcagtcaaaagcgcagtctcactcgggaagcttcccaag
gaggagcttcccgaatttttgaagccccagctcgccgtagaggctttcactccgccaact
ggctccaactggattcacgagctcaaactcgacggctatcgcattcaggcccatatcgac
cacggcaaggtaaagctattcacccggcgcggactcgactggacacatcgtatccggcct
gtcgccaccgctctggccaagcttccagtaacgacagccatcctcgatggagagctctgc
gccgtgcgtccagacggcaccaccagctttgccgatctgcaggcttccttcgagcatgga
gagcgccgggcactcacctacttcgtcttcgatctactgcatctcgacggtcacaacccg
cgcgatctgccgctactcaaacgcaaggccatggtcgagaagctgctgacacagcttgac
catccacagatccagatctcgcaacatttgcaaggcgacgcgaatgccatctttcagaac
gcttgcagcctgcatgcggaaggtatcgtcgccaagcgcggcgatgccccccatcgcgcg
acacgctcgccggagtggctgaagctgaagtgcattcgccagcaggagtttgtcgtcgga
ggcttcacgcttccctccaatgccatacacggcgtaggtgcactcttgctgggctattac
aacgacctgaagcagcttatctatgcaggccgcactggtacaggcttcgatgccaggact
catacgatgttgcgcgacaagctgaatgcgttgcgacaggcgaagcctgcttttcagcgg
gtccccaacgaagcgcagaagggcgtgctctgggtaaagcccgagctcgtcgctcaggtc
accttcacgacctggaccgccgacaatctcatacgacaggccgcctttcagggccttcgc
gaagacaaacctgcggaagaggtgcgccgcgaagagccaacggtcgctccctccgcgaag
caggagagagggaggatgccgatgccgcaagcagctataaaagcgccaacgcaaaattcc
atcgcagctcgagtcgcgacgaagaagaagacaaccgaagacgccgcgcctgtccgcctg
acccatcccgataaggttctcgatgcggccagccacctcaccaaacaacaactcgccaac
tactactgggcgatcgcaccgtacatgctgccccacatcaccaatcgcccgttatcgctg
gtgcgatgccctgaaggttccggcaaaccatgcttcttccagaagcatgtaaatcacacg
ttgccgccaggcatcacgggaactcccgtacccgataagaagacaggcaagatcgagcag
tacatcacgctctccacaccggaggcgctagccggactggcccagatgggagtgctcgag
gtccatccgtggggatcgcagaacgacgatctggagcggcccgatcgcgttgtcatcgat
ctcgatcctgacacagcaatctcctggagcactctctgtgacgctgccgcggaggtgcgc
gatcgtctgaagaagcttggtctaacctcctttttgaagaccacgggaggtaagggactg
catgtcgtcattcccatcacgccgaaacatgactatgcagcggtgaaagagtgggcgcat
gagttcgtgctgcagatggagcgcaacaatccgcggctctatctcagcaagatgagcaag
gccgcacgcgcgaaccatatcttcctcgactatctccgcaatgaacgaggagccacggca
gtggctccgttcagtccgcgcgctcgcgagggagcacatgtttcgctcccgcttccatgg
acggatctcaaacttcctgagcggcctgtctttacggttgtcgacttcgagacatggaag
ccgcggcttaagcgcgatccgtggaaagagatggggaaggtgaagcagcagttgccgatt
tag

DBGET integrated database retrieval system