Trichlorobacter ammonificans: GEAMG1_2648
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Entry
GEAMG1_2648 CDS
T09459
Name
(GenBank) Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)
Organism
tamm
Trichlorobacter ammonificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_4
CBS
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-ProteinID:
CAH2032484
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All DBs
Position
GEAMG1:complement(2801979..2805062)
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AA seq
1027 aa
AA seq
DB search
MTVERKSPAAGATEAPREGLSPLRRSGVLLTPLRISLLYALIGSLWVLWSDSTLSRAVSD
THVLAKLTSGKGLLFVATSALIIYVLVARLAVRLARSRELLSGVFEASSNGIVVVRDRDG
CCLLVNRAFCAMSGYDGAEIRGQREAELNFWHSREERAALLQYLRSDGVVREFEATFVHR
DGALRYGLVSARQLVFGEEPCTIVFVQDITQHKQISLQVEELTRFDPLTGLPNRNLLLDR
LQHLIAINSREERPFAVISLALARGVAAGHESFNELLRTAAARMRMALRETDTLAVSHYG
EFAVLLPRTATEQELIPVLTKLLECIREPVVLADGEYQVQGHIGIAVFPGDGRVGEALLH
NARLAMIQARECGEDGCFQFYSEAMNRAVSEQVQLEAGILQGIRRGEFFLNYQPLFDREG
KRLISIEALVRWRHPVLGLVGPDRFISIAEQNGAIVPLGELVMELAAGNCRHWREQGYRD
LTVAVNVSARQLKDPRFVERVAAILQRTGLPPQALCCELTESVLMEHSNELTERIFRLKE
LGVRLAIDDFGTGYSSLIYLKHLPVDIIKIDRSFVRDLVEHDDDLAIVSAIVALAKSLNL
RIVAEGVEKAAQHRLLRDLGCDLMQGYLFGKPMERDEFERFLTQEYVAASPDAAEAEPPE
PTPQRPPPLAMPFGLPVENGNGRMLEAVGEVVLQIPPVHPGDRLTTVLERFQSDKVLQAL
PVVDGGQVVGIMNRTEFIEEQILGRIGYAFHINHAKKVRDLMHPVPLVIEADTGIEEAAR
LIQGLSADLRLNNICVARRGSYLGMLDLRTLVDAMTALNLKLAKGANPLTGLPGNESIQR
EITRCLAQGSAFDIAYVDIDHFKPYNDFYGFERGDMAIRVVGDILRQMEEESALREGQRI
FCGHIGGDDFIVISTAESGAVLARRLIAEFELRLPILHGAQDHAAGQYVSLNRRGEQESF
SLLSLSVAIVSTARQPVESYAQLASLATEVKKSAKAIKGSSVVVRGVNGTAAGILSPSEA
EQLDLAA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgaaaggaaatcgccagccgccggcgcaacagaggctccccgcgaggggctg
tcgccgctgcgcaggagtggcgttctgctgacaccgctacgtatcagcctgctgtatgcc
ctgatcggatcgctctgggtgctctggagcgacagtacgctctcccgtgccgtctccgac
acacacgtgctggcaaaacttaccagcggcaagggactgctcttcgtggcaacctcagcc
ctgatcatctatgtgctggttgcgcggctcgccgtgcggctggcccgctcacgggagctg
ctcagcggagtgttcgaagcctccagcaacggcatcgtcgtggtcagggaccgggacggc
tgctgtctgctggtgaatcgggcgttctgcgccatgtccggttacgacggtgccgagatc
agggggcagcgggaagctgaactgaacttctggcacagccgggaggagcgtgccgcactg
ctgcagtaccttcgcagcgatggtgtggtgcgcgagttcgaagccaccttcgtgcaccgc
gacggggcgctgcgttacgggctggtcagcgcccggcagctcgttttcggagaggaaccc
tgcaccattgtgtttgtccaggacatcacccagcacaaacagatcagcctgcaggtggag
gagctgacccgcttcgatcccctgaccggcctgcccaaccgcaacctgctgctggatcgc
ctgcagcacctgatcgccatcaacagccgggaggaacggccctttgccgtcatatccctc
gccttggcgcggggagtggcggcgggacatgaaagtttcaatgaactgctgcggaccgcg
gcggcgcgcatgcgcatggcgctgcgtgaaaccgataccctggcggtatcccactacggc
gagtttgcggtgctgctgccccgtaccgccacggaacaggaattgattccggtgcttacc
aagctgctggagtgcatccgcgaaccggtggtgctggcggacggggagtatcaggtgcag
gggcatatcggtatcgcggtgttccccggcgacgggcgggtgggagaggcgctgctccac
aacgcccggctggccatgatccaggcgcgggagtgcggcgaggacggctgttttcagttt
tattcggaggcaatgaaccgtgccgtgtccgaacaggtgcagcttgaggccggcatcctg
cagggaatccggcgcggagagttttttctcaactatcagcccctcttcgaccgggaggga
aagcgcctgatcagcatcgaggcgctggtacgctggcggcatccggtgctggggttggtg
gggccggaccgtttcatctccatcgccgaacagaacggcgccatcgtgccgctgggggag
ctggtcatggagctggctgccggtaattgccgtcactggcgggagcagggatatcgcgac
ctgacggttgccgtcaacgtttcagcccggcaactgaaggatccccgcttcgtggagcgg
gtggccgctattctgcagcggaccggcctgccgccgcaggcgctctgttgtgagctgacc
gaatcggtgctgatggagcacagtaacgagctgaccgagcgaatcttccgcctcaaggag
ctgggggtcaggctggccattgatgacttcggtaccggctactcatccctgatctatctg
aagcacctgccggtggacattatcaagatcgaccgctcgttcgttcgcgacctggtggag
cacgacgacgacctggccattgtcagcgccatcgtggcactggctaagtcgctgaacctg
cggatcgtggcggagggggtggaaaaggcggcacagcaccgcctgctgcgtgatctggga
tgcgatctgatgcaggggtacctgttcggcaagccgatggagcgcgacgagttcgaacgg
tttttgacccaggaatacgtggcggcatcgccggatgcggctgaggctgagccgcccgag
ccgacgccgcagcgtcccccgcctctggcgatgccgttcggcctgccggtggaaaacggc
aacgggcggatgctggaagcggtcggggaggttgtgctgcagattccgccggtgcatccc
ggcgaccggctgaccacggtactggagcggtttcagagcgacaaggtgttgcaggccctg
ccggtggtggacggggggcaggtggtcgggatcatgaaccgcaccgaatttatcgaggaa
cagattctggggcggatcggctatgcttttcatatcaaccacgccaagaaggtgcgcgac
ctgatgcatccggttccgctggtcatcgaggcggataccggtatcgaggaggcggcccgc
ctcatccagggactgtcggcggacctgcggctgaacaatatctgcgtagcccgccgcggc
agctacctgggcatgctggatctgcgcaccttggtggatgccatgaccgccctgaacctg
aagctggccaaaggggccaatcccctgacgggcttgccgggcaacgaaagcatccagcgg
gagatcacccgctgcctggcccagggcagcgccttcgacatcgcctacgtcgatatcgat
cacttcaagccgtacaacgatttttacggctttgaacggggtgacatggccatcagggtg
gtgggggatatcctgcgccagatggaagaggaatcggccctgcgggagggacaacggatc
ttctgcggccatatcggcggcgacgacttcatcgtcatctcgacggcggaaagcggcgcg
gtcctggcccggcggctgatcgccgaattcgaactgcggctgccgatcctgcacggggcc
caggaccatgcagcgggtcagtacgtctcgctcaaccgtcggggtgagcaggagagcttc
agtctgctctcgctttccgtcgccattgtcagcacggcccgccagccggttgagtcctac
gcccagttggcctcgctggccaccgaggtcaagaagtcggccaaagcgatcaaggggtcg
tcggtggtggtgagaggggtgaacggcacggcggccggtatcctgtcgccctctgaagcc
gaacagctcgacctggccgcatga
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integrated database retrieval system
