Candidatus Thiothrix anitrata: J8380_01530
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Entry
J8380_01530 CDS
T07878
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani00521
Streptomycin biosynthesis
tani00523
Polyketide sugar unit biosynthesis
tani00541
O-Antigen nucleotide sugar biosynthesis
tani01100
Metabolic pathways
tani01110
Biosynthesis of secondary metabolites
tani01250
Biosynthesis of nucleotide sugars
Module
tani_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
J8380_01530 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J8380_01530 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J8380_01530 (rfbC)
Enzymes [BR:
tani01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
J8380_01530 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Nudc_N
Motif
Other DBs
NCBI-ProteinID:
QTR50293
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All DBs
Position
313610..314158
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AA seq
182 aa
AA seq
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MKIIATRIPDVKIIEPAVFGDPRGFFMESWHSQKFAELGLDLHFVQDNHSRSRQGILRGL
HYQMLQTQGKLVRVTSGCVFDVAVDVRRSSPSFGQWVGVELSDENHRMLWVPPGFAHGFY
VMSESADFLYKCTDFYNPAHETCIRWNDPALAIDWPLVDGQAPLVSVKDAAGNLWQDAET
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatcgctacccgcatccctgatgtgaaaatcattgaaccggcggtgtttggt
gatccgcgtggcttttttatggaaagctggcattcgcaaaaatttgctgaactcggtctg
gatttgcactttgtgcaagacaatcacagccgttcacgccaaggtattttacgcggtttg
cattaccaaatgttacaaacccaaggcaaactggtgcgcgttaccagcgggtgcgtgttt
gatgtagcggtggatgtacgccgcagctcccctagtttcgggcaatgggtaggggtggaa
ttatccgatgaaaatcaccggatgttgtgggttccgcccggctttgcgcacggcttttat
gtgatgagcgagtccgctgatttcttgtataaatgcaccgacttttataaccccgctcac
gaaacttgcatccgttggaatgacccggcgctggcgattgattggcctttagtcgatggg
caagcacccttagtatccgtgaaagatgcggcaggcaatttgtggcaggacgcggagact
tttgcatga
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