Thermus antranikianii: KNN15_11370
Help
Entry
KNN15_11370 CDS
T07371
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tant
Thermus antranikianii
Pathway
tant03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KNN15_11370 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tant03400
]
KNN15_11370 (mfd)
Enzymes [BR:
tant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KNN15_11370 (mfd)
DNA repair and recombination proteins [BR:
tant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
KNN15_11370 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
CarD_TRCF_RID
Helicase_C
ResIII
UvrB_inter
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QWK21599
LinkDB
All DBs
Position
complement(2100037..2102973)
Genome browser
AA seq
978 aa
AA seq
DB search
MEIALERYYGHRLALPQVVAALIFARERPPALLLAPEERLRRYRDLLAFGVLVYVNPGLE
AWEERALFVMSYEEALAPFPEDPSAWRLVLEVGRSYPRGELLDRLLRMGYARDEDYRVLG
EVLELGGVRLEFFGEELERLLVEGEERRRHILLPKPGKAEAFTSRKLLHFPGPVYLDTPA
LAPKEVWSLLRGRQVVALGSGVELPPLDLGVRPLPPYRGSLKALEKDLVRWLGEGRRVSL
FVAHERTLDYLKRRLAPFRPQVPERFPGPKGQLSLFRGAFEGGAEWGEEVFLTEALVFAT
GAVRARLRVGEGLTDPGALSPGDFLIHPDHGVGQYLGLETREVLGVRRDYLVLRYKGEGK
LYLPVEQLPLLKRHPGTTDDPPELSSLGKGEWQRLKEKARKDVEELAARLLILQAKRKAT
PGRAFPPLPEWDPLIERGFPYELTPDQKQALEEVLRDLEAPFPMDRLISGDVGFGKTEIA
LRAAHRVVGHGAQVAFLVPTTLLAEQHGKTFRERFAGLPVRIGVLSRFTPEREEKSILEG
LEKGTLDIVIGTHRLLQPDVRFKDLGLLIVDEEHRFGVAQKERIRELKAEVDTLYLSATP
IPRTLYSALVGLKDLSSIKTPPPGRKPIRTFLAPFDPLLVREAILFELERGGKVFYVHDR
VASIEARRRYLENLVPEARIGVVHGQMPEGLVEETMLLFAEGAYDVLLATTIIESGLDVG
EANTILIERADRLGLATLYQLRGRVGRREQEAYAYLFHPPRLTEAAEKRLNAIADLSDLG
SGHLLAEKDMEIRGVGNLLGPEQHGHIRALSLEVYSELLEEAIRKLKGEAKEERRHVTLD
LGVSARLPAEYVPSLEGRSRYYGRLAEARSLAEVSRIARELKDRYGPLPEEAENFLALAR
LRLVAERKGVVSITEDLTHLQVVFPRWPLDYDAKALRQLPFRVELTQYPPGFRLEKKGLK
PRDYPEALLQALYLFADI
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgccctggaacgctattacgggcaccgcctggccctgccccaggtggtggcg
gccttgatctttgcccgggagaggcccccggccctccttctggccccagaggagcgcttg
aggcgctaccgggacctcctggcctttggcgtgctggtttacgtgaaccctggcctcgag
gcctgggaggagcgggccctcttcgtgatgagttacgaggaggccctcgctccctttcct
gaggacccctccgcctggcggctcgttttggaggtgggccgaagctatcctcggggggag
ctactggaccgcctcctgcgcatggggtacgcccgggatgaggattaccgggtactgggg
gaggtgctggagcttggcggggtgcggctggagttcttcggggaagagctagagaggctt
ttggtggagggagaggaacgcaggcggcacatccttctacccaagccgggcaaggccgaa
gcctttacctccagaaaactccttcactttcctggccccgtgtacctggacaccccagcc
ctggcccctaaggaggtctggtcccttttaagggggcgtcaggtggtggccctggggagc
ggggtggagcttcctcccttggacctgggggtgaggccccttcccccgtacaggggaagc
cttaaagccctggaaaaggaccttgtccgctggcttggggagggcaggcgggttagcctc
ttcgtggcccacgagcgcaccctggactacctgaaaaggcggcttgcccccttccgtccc
caggtacccgagcggtttccggggcccaagggccagctttcccttttcaggggagccttc
gaggggggggcggagtggggggaggaggttttcctcaccgaggccttggtctttgccacc
ggggcggtgcgggccaggttgcgggtgggggaggggcttaccgaccctggggctctctcc
cctggggatttcctcatccaccccgaccacggcgtgggccagtacctgggcttggaaacc
cgggaggtcctgggggttaggcgggactacctggtcctccgctacaagggggaggggaag
ctttaccttccggtggagcagctgccccttctcaagcgccatcccggcaccacggatgac
cctccggaactttcttccctgggcaaaggggagtggcagcggcttaaggagaaggccagg
aaggatgtggaggagctggcggcacggcttctcatccttcaggccaagcggaaggctacc
ccgggccgggcctttcctcccttgccggagtgggatccccttatcgagaggggcttcccc
tacgagctcaccccggaccagaaacaggccctggaggaggtcctgcgggacctcgaggct
cctttccccatggaccggctcatctccggggacgtgggctttggcaagacggagattgcc
ctccgggctgcccaccgtgtggtggggcacggggcccaggtagcctttttggtgcccacc
acccttttggcggagcagcatggcaagaccttccgggagcggtttgccgggcttcctgtg
cgcatcggggtgctttcccgctttacccctgagagggaggagaagtccatcctggaggga
ttggaaaagggcaccctggacatcgtcatcggcacccaccgtcttctccagcccgacgtg
cgctttaaggatcttgggcttctgattgtggacgaggagcaccgcttcggggtggcgcag
aaggagcggatccgggagctgaaggccgaggtggataccctttacctctccgccacgccc
atcccccgcaccctttattccgccctagtgggcctgaaggacctatccagcatcaagacc
ccacccccaggccggaagcccattcgcaccttcctggctccctttgacccccttttggtt
cgggaggccatcctctttgagctggaaagggggggcaaggtgttctacgtgcacgaccgg
gtggcctccatcgaggcgagaaggcgctacctggagaacctggtgcccgaagcccgcatc
ggggtggtccacggccagatgcccgagggcctggtggaggaaaccatgctcctcttcgcc
gagggggcttacgatgtccttctggccaccaccatcatcgaatcaggcctggacgtgggc
gaggccaacaccatcctcatcgagcgggctgaccgtctgggcctcgccaccttgtaccag
ctccggggccgggtggggcggcgggagcaggaggcctacgcctacctcttccatcctccc
aggctcaccgaggcggcggaaaagcgcctcaacgccatcgctgatctttccgacctggga
agcggccatctcctggcggagaaggatatggagatccgcggcgtggggaatctcctgggc
cccgagcaacacgggcacatccgggctctatccctcgaggtctacagcgagcttctggaa
gaggccattcgcaagctcaagggggaggccaaggaggagagaaggcacgttaccctggac
ctgggggtttccgcccggcttcctgcggagtacgtgccgagcctcgagggccgtagccgc
tactacggccgtctggccgaggccaggagcctggcggaggtttcccgcatcgccagggaa
cttaaggaccggtatggcccccttcccgaggaggcggaaaacttcctggcccttgcccgg
ctccgcctggtggcggaacggaaaggggtggtctccatcacggaggaccttacccacctc
caggtcgtctttccccgctggcccctggattacgacgccaaggccttgaggcaacttccc
ttccgggtggagcttacccagtatcctcctggctttcgtctggagaaaaagggcttgaag
ccccgggactaccccgaggctttgctccaggccctgtacctcttcgccgatatttag
DBGET
integrated database retrieval system
