Thermus aquaticus: TO73_0966
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Entry
TO73_0966 CDS
T04117
Name
(GenBank) putative internalin
Organism
taq
Thermus aquaticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
Beta_helix
DUF11
CarboxypepD_reg
DUF4369
CusF_Ec
Big_6
Motif
Other DBs
NCBI-ProteinID:
ALJ90814
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Position
849935..854005
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AA seq
1356 aa
AA seq
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MQYNGLPNGTTSVDLRFTSSQDVYFPQVLTFAVNLYLPDLTTTFTKTVQDLNGGDVLPGD
VLEYTISFTNTGLDGATNVVLRDPIPAHTQYVPGSLRVLTNATGAPTGTFTDAAGDDIAE
YAPSCPEFSGAPCVRFRLGTGANATSGGLIPPTQGASVRFRVQVLPSAAGQTITNTAQIS
YNSQTLGTSYSKTASASVQIPVYQRISGKVYEDPIGNAQPSGFVPRPGVRVRLYQDLNNN
GQIDASDTFVAETTTASDGSYTFSVLNGYYLVAVDSRSVSPSAGFNTGYGQGDVWAEQTY
GEDPTTPALDLGPRYGGANPGASDGFNPSDTAPSANTGAKHLARVQVSGSDVSGVDFAFS
FNVVTNLRGGDTADDDASANRTVQGSLRQFLQNANAIAGPNAMRFVPASPYAPNTSGSGG
SWWTLSVSNPLPFVLDQYTTLDGTAYDAQNPLSLRDTNPGVLGTGGTVGVDGLPLPQTPR
PELALDFSAQTNASGTAGIRVEAQNTTIRRLSLYGQRGFSTGGQAAIFVTSAGQATLEEL
VVGALPDGSDPTSVGAQQNRRYGVRLEGRATVRGSFFAYNGYAILLNGPSAQGSQIEGNE
FAHNGPNSTTTEGAADGDTVAFWNSGTAWTTPTVFRGNLVRDVREVSGLSAATDRGKGLE
LWYSGTRNVLIENNTIVRARTAGVGIHGGAQGNTLRKNIIQDTLGYAGQGGAGVHLSNTG
GTPLRNRITQNHFGNNRGLAIDLDSGAGTVGNGVTPNDGNCNNTSEPNVGLDFPVITRAQ
AVGSSLLVEGTACPNVTVEVYKAVAGSGDFLGGLGYGEGVLYLGSGTASSSGAFSFTVPL
SGLSPGDYVSAIAIDTGGNTSEFSANFQVVFGYTLSGQVYHDREPNGMRNGEDWSDGATV
YVKLVQGSTVVAVQTVNPGSGTYTFTGVAPGSYTLVLDDNNDPADTTPTPPSGWLFINPA
LGSRSVTVAGADVTGQDFGLFHGFRLEGRVFLDDGEGGGDANNALQDGGERGVPGVVVTA
TDGTNSRTATTDGLGFYRLYIPYSFGSVTLSHPARPATGWNDGTTAYQVASWAEATAPNS
SGATVNLGPASALSGVVVRNFGVVRESRLYPDASGQTGSPGAITYAHLIKPGTLGSYTLS
LANAPRFAYQVRRDVNCDGDFDDPGEGFQGLPLTFTVDATWPREADGSLKACGLEVRVLV
PAGEPDGSLDIALLSGALSYANNPGVVETRSLTDTTTVSTGQVRLEKRVRNVTQGTAFGA
SASGKPGEVLEYCIAFRNLGTAAVTGFVLTDPIPFFTDLWPYGPSQDIKLTAGTTTYLTA
APGDDQGEVVGGVVRVALGTLGPGAYGEVCYQARIR
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtacaatggcctacctaacggtaccacctcggtagaccttcggttcacttcttct
caggatgtctatttcccccaggtgctcactttcgcggtcaacctctacctccctgacctg
accaccaccttcaccaagaccgtccaggacctaaacgggggcgatgtcctgccgggggat
gtgctggagtacaccattagcttcaccaacaccggcctagacggcgcaaccaacgtggtg
ctgcgcgaccccattcctgcccacacccagtatgtgcccggcagtctgcgggtactcacc
aacgccaccggagcccccaccggcacctttaccgacgccgccggggacgacatcgccgag
tacgccccctcctgccccgagttctcgggtgccccctgtgtgcgcttccggctgggaacc
ggggccaacgccaccagcggtgggttgattccgcccacccagggggccagtgtgcgcttc
cgggtacaggtgctgccctccgccgcgggccagaccatcaccaacaccgcccagataagc
tacaacagccagaccctgggtacgagctacagcaaaaccgcttcggccagcgtccaaatc
ccggtctaccagaggatcagcggcaaggtctacgaggaccccatcggcaacgcccagcct
tcgggcttcgtgccccggcccggggttagggtccgcctctaccaggacctcaacaataac
ggccagatagacgcctccgacaccttcgtggccgaaaccaccaccgcctcggacgggagc
tacacctttagcgtgttgaacggttactacctggtggccgtggattcccgttccgtgagc
cccagcgctggcttcaacaccggctacggccagggggatgtctgggcggagcagacctac
ggagaagaccccaccacccccgccttggacctgggcccccgctacggcggggcgaacccc
ggggcctcggacggcttcaacccctccgacaccgctccttccgccaacaccggggccaag
cacctggcccgggtccaggtttcgggtagcgacgtgagcggcgtggacttcgccttcagc
ttcaacgtggtgaccaacctgcggggcggggacaccgccgacgacgacgccagcgccaac
cgcaccgtccagggctcgctccgccagttcctgcagaacgccaacgccattgcaggcccc
aacgccatgcgcttcgtgcccgcaagcccctacgctcccaacacctcgggctcaggcggg
agctggtggaccttaagcgtcagcaaccccctgcccttcgtcctggaccagtacaccacc
ctggacggcaccgcctacgatgcccagaaccctctttccctgcgggacaccaacccgggc
gttttgggcaccgggggcacggtgggggtggacggccttcccctgccccagacccccagg
cccgagctggccctggacttcagcgcccagaccaacgccagcggcacggcgggcatccgg
gtggaggcccagaacaccaccatccggcgcctgagcctctacggccagcggggctttagc
acggggggacaggcggccatcttcgtcaccagcgcgggccaggccaccctggaggagctg
gtggtgggggcgcttcccgatggaagcgacccgaccagcgtgggggcccagcaaaaccgc
cgctacggggtgcgcctcgaggggcgggccaccgtccgggggagcttcttcgcctacaac
ggctacgccatcctgctcaacggcccctcggcccaggggagccagattgaggggaacgag
ttcgcccacaacggccccaactccaccaccaccgagggggcggcggacggggacaccgtg
gccttctggaacagcgggaccgcctggaccaccccgaccgtcttccgggggaacctggtg
cgggacgtgcgggaggtaagtgggctctcggcagccaccgaccgggggaaggggcttgaa
ctctggtactcgggcaccaggaacgtcctcatagagaacaacaccatcgtgcgggccagg
acggcgggggtggggatccacggcggggcccagggcaacaccctgcggaagaacatcatc
caggacaccctgggctacgccggccagggcggggcgggggtgcacctctccaacaccggg
ggcacgcccctccggaaccgcatcacccagaaccacttcggcaacaaccggggcctggcc
atagacctggacagcggtgccgggacggtggggaacggggttacccccaacgatgggaac
tgcaacaacacctccgagcccaacgtgggcctggacttccccgtgatcacccgggcccag
gcggtgggcagtagcctcctcgttgagggcacggcctgtcccaacgtgaccgtggaggtg
tacaaggcggtggcggggagtggggactttttgggaggcctcggctacggggagggggtc
ctttacctggggtctggcaccgccagctctagcggggccttcagcttcaccgtgcccctt
tcgggcctgagcccgggcgattacgtgagcgccatcgccattgatacgggcggcaacacc
tcggagttcagcgccaacttccaggtggtcttcggctacaccctttccggccaggtctac
cacgaccgggagcccaacggcatgaggaacggggaggactggtcggacggggccacggtg
tacgtgaagctggtgcaagggagcacggtggtggccgtgcagaccgtaaaccctgggagc
gggacctacaccttcaccggggtagcccccggcagctacaccctggtcctggacgacaac
aacgaccccgccgacaccacccccacgccgccctcgggctggctcttcatcaaccccgct
ttgggaagccggagcgtgaccgtcgcgggcgccgatgtgaccgggcaggacttcggcctc
ttccacggcttccgcttggaggggcgggtcttcctggacgacggggaggggggcggcgac
gccaacaacgccttgcaggacggcggtgagcggggggtgcccggggtggtggtgacggcc
acggacggtaccaacagccggacggccaccacggacggcctgggcttctaccggctttac
atcccctatagcttcgggagcgtgaccctctcccacccggcccgcccggccacgggttgg
aacgacgggaccacggcttaccaggtagcttcctgggcggaggccactgcgccaaactcc
agcggggccacggtgaacctgggcccggcctcggcgctttctggcgtggtggtgcggaac
tttggcgtggtgcgggagagccggctttacccggacgcctccgggcagacgggctctccc
ggggccataacctacgcccacctcatcaagcccgggaccctggggagctacaccctgagc
ctggccaacgccccccggttcgcctaccaggtgcgccgggacgtgaactgcgacggggac
tttgacgaccccggggagggcttccaggggcttcccctcaccttcaccgtggacgccacc
tggccccgggaggcggacgggagcctgaaggcctgcggcctggaggttcgggtcctggtg
cccgccggggagcccgatgggagcctggacatcgccctcttgagtggggcccttagctac
gccaacaaccctggggtggtggagacccgtagcctgacggacaccaccacggtgtccacg
gggcaggtgcggctggagaagcgggtgcggaacgtgacccaggggacggcctttggcgcc
tcggcttcgggcaagcctggggaggtgctggagtactgcatcgccttccggaacctgggg
acggcggcggtgacgggctttgtgctgacggaccccatacccttcttcacggacctgtgg
ccttacggcccctcgcaggacatcaagctcaccgctggcaccaccacctacctgacggcg
gcaccaggggacgaccagggcgaggtggtggggggcgtggtgcgggtggccttggggacg
ctagggcctggggcctatggggaggtatgctaccaggccaggatccgctga
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