Trichosporon asahii var. asahii: A1Q1_05709
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Entry
A1Q1_05709 CDS
T06566
Name
(RefSeq) pre-mRNA splicing factor
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A1Q1_05709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasa03041
]
A1Q1_05709
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A1Q1_05709
Spliceosome [BR:
tasa03041
]
Complex A
U2 snRNP components
U2 related factors
A1Q1_05709
Complex B
A1Q1_05709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
25989221
NCBI-ProteinID:
XP_014176393
UniProt:
J5SIF7
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MPHSPRRSRSPEHRRSSHRYQSPSPPRSRDRDRERDRRDYRDDRHRDRERDRDPRDRDRD
RRQDDRYVRDRGDRDRDRDRYRDRGERDRYERRYDDRDYRSHRDRDRDYDRRDDRDRDRR
RDDDRRRDDDRRDRGDRDRDRERERERANGHSAARSPERLRTPASNSPAPASEEEKLRLK
RERLEAWKKQRAAKSANASGNVSAASTPEPEKSPAKRELLKSLMCNSLTSAAPGKSGLSF
SAQSLGRIGLVNKPTPLKRSLMMDDEEVEDRKLQKLDMPKVADEVQSGSAAGVDAVPEDM
AAVDGDENEDDVVKVEAGADADSKMDVDEEEEDPLDAFMRQNAQEVKSVNVSDAKKQGYA
EELDSDDDVEVRNKAEEELAKAEALLQLAASKTRKKDLPTPDHDAIDYEPFRRNFYTAPA
EVLDMDEEEAELVRLEMDGIKVRGLDAPKPVRSWGAFGLPLGCLEVIRAKEWGAPTAIQA
QSIPSIMSGRDVIGIAKTGSGKTIAFLLPLLRHVKDQRPVSGMDGPIALILAPTRELAMQ
IYKESKPFAKVMNLRVTCCVGGQSISDDIAAMKKGAEIVVCTPGRMIDLLTANNGRVTNL
RRITFMVMDEADRMFDMGFEPQVMKIVNNTRPDAQKVLFSATFPKTMESLARKILVKPLE
ITVGGRSVVAPEIDQRVEVRDADTKFNRLLEILGEIGQDHPDEPDYRVLIFVDRQESADE
LFRELLQRGYLCTSLHGGKDQVDREDAIRNFKSGDIPIVIATSVAARGLDVKQLKLVINY
DAPNHMEDYVHRAGRTGRAGNTGTCITFITPDQEKFSVDIARALEASGAFVPDKLKEMSE
GFLAKIKSGKARAARSGFRGKGLERLDHKRQEKDRAEKQTYGDTSEAVSLSSREGAVIPY
KPATKETKSTTNDSHLMAGDTDYTFTEIAVEIVHGPAPDKLPSDLAHRGSRNDAKSLPAQ
TLAMLEKARKEGRHIDAANLSKIAQKLSKQIEHSKAAALGAALPPSDPSRRKDPDATEWH
AMFPINDYPQKARWKATNKEQMMLLQEHSGASITMRGVYYPPGHEPEAGQEPKLHLLIES
NDEMRVRSAVEELRRSLVEASVQALNSADRAHASGGRYAI
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgccgcactctcctcgtaggtctcgctcccccgagcatcgccgttcctcacaccgctat
caaagcccgtcgccgccccgctcccgcgaccgtgaccgtgaacgagaccgaagagattac
cgcgacgaccgccatcgagaccgcgaacgcgacagggacccccgcgaccgtgatcgcgat
aggaggcaagatgaccgctacgtgagagacaggggcgaccgcgaccgagaccgcgaccgc
taccgtgaccgtggtgagcgcgaccgttacgagcgtcgttacgatgacagagactaccga
agccaccgtgaccgcgatcgcgactacgaccgccgagacgacagggacagggacaggcgc
agagacgacgacaggagaagagacgatgacaggcgagaccgcggtgaccgtgatcgggac
cgcgagagggagcgtgagcgcgctaacggacactctgccgcgcgctcgcccgagcgcctc
cgcacgccggcgtccaactctcccgctcccgccagcgaggaggagaagcttcgtctgaag
cgcgagcgtctcgaggcctggaagaagcagcgcgctgctaagagcgccaatgcgtcaggc
aacgtctccgccgccagcaccccggagcccgagaaatcgccagccaagcgtgagttgctc
aagtcgctgatgtgcaactcgctaacatcagccgcccctggcaagtctggtctgtcgttt
agcgcgcagtcgctcggtcgcatcgggctcgtcaacaagccgacgccgctgaagcgctcg
ctcatgatggacgacgaggaagtcgaagaccgcaagttgcaaaagttagacatgcccaag
gttgccgatgaagtacaaagtgggtccgccgccggcgtagatgccgtgccagaggatatg
gcggccgttgacggcgatgaaaacgaggacgacgttgtcaaggtcgaagccggtgccgac
gccgactcgaaaatggacgtcgacgaggaagaggaagacccgctcgacgccttcatgcgc
cagaacgcccaggaagtcaagtctgtcaacgtgtccgacgccaagaagcagggctacgcc
gaggagctggacagcgatgatgacgtcgaggtacgcaacaaggcagaggaggagcttgcc
aaggccgaggctctgctgcagctcgcagcatccaagacccgcaagaaggacctgcccacc
ccagaccatgacgctattgactacgaacccttcaggcggaacttttacacggcccccgcc
gaggtccttgacatggacgaggaggaggctgagctcgtccgcctcgagatggacggtatc
aaggtccgtggtctggatgcccccaagcctgtgcgcagctggggtgcgtttggtctgcct
ctcggctgcctcgaggttatccgtgcaaaggaatggggtgcgcccactgcgattcaggca
cagtcgattccgtcgatcatgtccggtcgcgatgtcatcggtatcgccaagactggctcc
ggcaagaccatcgccttcctgcttcctctgctgcgtcacgttaaggaccagcgaccggtg
agcggaatggacggccccatcgctctcatcctcgcgcccacccgtgagcttgccatgcag
atctacaaggagtccaagccgttcgctaaagtcatgaacctgcgcgtgacctgctgcgtc
ggcggccagtccatcagtgacgacattgctgccatgaagaagggagccgagatcgtggta
tgtacgccgggtcgcatgatcgacttgttgactgccaacaatggtcgcgtgaccaatctg
cgtcgtattacgttcatggttatggacgaggccgaccgcatgttcgacatgggcttcgag
ccgcaggtcatgaagattgtcaacaacacgcgccccgacgcccagaaggtgctgttctcc
gccacgttcccaaagaccatggagtcgctcgcgcgcaagattcttgtcaagccgctcgag
attaccgtcggtggccgttccgtcgtcgcacccgagatcgaccaacgcgttgaggtccgc
gacgccgacacaaaattcaaccgtctgctcgagattctcggcgagatcgggcaggaccac
cccgatgagcccgactaccgtgtgctcatcttcgtcgacaggcaggagtcggccgacgag
ctcttccgcgagcttctgcagcgtggatacctgtgtacttcgctgcatggcggcaaggac
caggtcgatcgtgaggacgctatccgcaacttcaagagtggcgacatcccgatcgtcatc
gcgacatcggtcgctgcccgtggtctcgacgtcaagcaacttaaactggtcatcaattat
gacgcccccaaccacatggaggactacgtccaccgtgctggtcgaacgggtcgtgccggc
aacacgggtacctgcatcaccttcatcacgcctgaccaggagaagttctcggtcgacatt
gcgcgtgcgctcgaagcctcgggcgcgttcgttcccgacaagctgaaggagatgtcggag
ggtttcctcgccaagatcaagtcaggcaaggctcgcgctgcccgttccggcttccgcggc
aagggtctcgagcgcctcgaccacaagcgccaagagaaggaccgcgccgagaagcagacg
tatggcgacacgtcggaggctgtctcgctgtcttcgcgcgagggtgctgtcattccgtac
aagccggctacgaaggagacgaagagcacgacgaatgactcgcacctcatggccggtgac
accgattacaccttcacggagattgccgtcgagattgtccacggtccggctcccgacaag
ctcccgtccgaccttgcgcaccgtggttctcgcaacgatgccaagtcgcttcctgcgcag
actcttgcgatgctcgagaaggcgcgcaaggagggccgccacatcgacgccgcgaacctg
tccaagattgcgcagaagctgtccaagcagatcgagcacagcaaggctgctgccctcggt
gctgctctgccgccgtccgacccgtcgcgccgcaaggacccggacgcgactgagtggcac
gccatgttcccgatcaacgactacccgcagaaggcgcgctggaaggcgacaaacaaggag
cagatgatgctcctgcaggagcattcgggtgcgtccatcaccatgcgcggtgtgtactac
ccgcccggacacgagcccgaggcaggccaggagcccaagctgcacctgctcattgagtcc
aatgacgagatgcgcgtgcgctccgccgtcgaggagctgcgccgctcgctcgtcgaagcg
tccgtccaggcgctcaacagcgccgaccgcgcgcacgcgtctggaggaaggtacgccatc
taa
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