Tatumella sp. TA1: EFZ10_09305
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Entry
EFZ10_09305 CDS
T09934
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
tatu
Tatumella sp. TA1
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatu03400
]
EFZ10_09305
DNA repair and recombination proteins [BR:
tatu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
EFZ10_09305
BRITE hierarchy
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
SLFN-g3_helicase
DZR
AAA_22
zf-ribbon_3
AAA_16
zf-tcix
TPP_enzyme_N
zinc_ribbon_2
SNF2-rel_dom
AAA
UPF0547
Motif
Other DBs
NCBI-ProteinID:
QGX91805
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All DBs
Position
1919452..1921203
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AA seq
583 aa
AA seq
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MSFTLRPYQQEAVEAAVHYFRQEQRPGVIVLPTGAGKSLVIAELARIARGRVLVLAHVKE
LVRQNHAKYRALGLEADIFSAGLAQKESQKKVVFGSVQSVARHLDKFDAAFSLVIVDECH
RIGDNDQSQYQQILDYLTQRNPQLRLLGLTATPFRLGKGWIYHHHYHGMVRGNEDALFHQ
CIYELPLRYMIKHGYLVEPQRLDMPIVRYDFSSLIATQQGLFPEKALNLSLSQQKRVTPS
IVAEIIRHAEHCRGVMIFAATVRHAEEILSYLPHDSALVSGATPGAQRDDILQRFTSQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIIGRGLRLYPGKTACLILDYAGNNY
DLYLPEIGSPQGDSDNQPVQVFCPQCQFANLFWGKTLADGTVIEHFGRRCQGLVEVSGRT
EQCDFRFRFKSCPQCNAENDIAAKVCQQCDTVLVDPDDMLKAALKLRDAKVLRCSGMVLE
HGRDQKGEWLRITYVDEDGAEIPETFRLSSPAQRHIFTTQFLHLHSRAPGIPLVWQSAED
IVAQQSRLRHPDFVVAHHQKHFWKIRHKVFDYQGRYRRADAAG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaccctacgcccctatcaacaggaagccgtcgaggcggcggtacactatttt
cgtcaagagcagcgccctggcgtcatcgtcctgccaacaggtgccgggaaaagcttagtt
atcgcagaacttgcccgtatcgcgcgcggccgtgtattagtcttagcgcatgttaaagaa
ttagtccgtcagaatcatgccaagtaccgcgcactgggcctagaggcagatatattttca
gccggcctggcgcaaaaagagagtcaaaaaaaagtcgtcttcggtagtgtacaatcagtc
gctcgccaccttgataaattcgacgcggccttctcattagttatcgtcgatgagtgtcac
cgcataggggataacgaccagagtcaataccagcaaattctcgactacttaacgcagcgc
aacccgcagttacggctcttgggcttaacggctaccccctttcggcttggcaaaggatgg
atttatcatcaccattaccacggtatggtgcggggtaatgaagacgccctatttcatcaa
tgtatctatgagctaccactacgctatatgattaaacatggctatttagtggagccgcag
cgtcttgatatgccgatagtccgttacgacttctcatcgctgatcgccactcaacagggg
ctttttcctgaaaaggcgctcaaccttagcttgtcacagcaaaaacgggtcaccccctct
atcgtcgcagaaatcattcgccacgccgagcactgtcgaggcgtaatgatttttgcggcg
acggtacgccatgctgaagagatcttgagctatcttcctcacgatagcgcattagtttct
ggtgcaacgcccggggcacagcgcgatgatatcttgcagcgtttcacctcccagcagctt
aaatttttagtcaatgtcgcggtgctgacgacgggctttgatgccccccacgtcgatctt
attgccattttacgcccgacagaatcagtaagtctttatcagcagattatcggtcgcggc
ttacgcctctatccggggaaaacggcctgtcttatcctggattatgcaggtaataattat
gatctctatctaccagaaatcggcagcccgcagggagatagcgataaccaacccgtacag
gtgttctgtccacagtgtcagttcgccaatctattttggggaaagacactggccgatggg
accgtcatcgagcatttcggacgacgctgccaagggcttgtcgaggtgtcagggcgaacc
gagcagtgtgattttcgttttcgatttaagtcttgtccgcagtgtaacgccgaaaacgat
atcgccgccaaagtctgtcagcagtgcgatacggtattagtggatcctgacgacatgtta
aaggcagcccttaagctgcgtgatgcgaaagtattgcgctgttcaggcatggtactggag
cacgggcgcgatcaaaaaggagagtggctgcgcattacctatgtcgacgaagatggtgcc
gagatccccgaaacgtttcgcctgagctcccctgcgcagcgtcatatctttacgacacaa
tttcttcacttacacagccgagcacccggcatcccgctcgtatggcaatcggcagaagat
atcgtcgctcagcaatcacggttacgccaccctgattttgtggtggcacaccatcaaaaa
cacttttggaagatccgccataaagtctttgattatcagggacgctacaggcgcgcggac
gcggcaggttag
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