Thermococcus barophilus: TERMP_01017
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Entry
TERMP_01017 CDS
T01377
Name
(GenBank) ATP-dependent RNA helicase
Organism
tba
Thermococcus barophilus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_helicase_helical
ERCC4
Helicase_C
DEAD
ResIII
HHH_2
HHH_5
HHH
SWI2_SNF2
UPF0758_N
SecA_DEAD
HHH_3
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
ADT83993
UniProt:
F0LML4
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Position
888504..890816
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AA seq
770 aa
AA seq
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MYLRRDLIQPRVYQEVIYAKCKDKNSLIVLPTGLGKTLIAMMIADYRLSKYGGKVLMLAP
TKPLALQHRESFVRLFNLPPEKINVLTGELPPEQRAKIWERSIIITATPQTTENDLLVGR
ISLEDVVLLVFDEAHRAVGNYAYVYIAKEYMQQAKHPLILGLTASPGNDEEKIRQVLKNL
YIEHVEVRTESSPDVRPYVQGIRFEWIKVELPGIYKEVRKLLREMLKDTLKPLAEAGLVD
SYSPDIPKKDVLKAGQIINAEVAKGNYEIGKLMLHQAKAMKLHHAIELLETQGLTALRAY
LKRLYEERQTKSNKELMSDPRMKKAVSLLIQARDLGLDHPKMDKLKELIKEQLEKKPNSK
IIVFTNYRDTAKKIVKELVDMGIKVSRFVGQASRENDRGMSQKKQKEILDLFSQGIFNVL
VATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHKPGRVVILMAKGTRDEAYYW
SSRHKEKQMIAVLKKVSEMIKKEKQASLLGFVKPKKEEEKEEITAEEEKEQRKAEVSKEE
VYGKLPVRPIFVKKPKGIVIYVDSRELKSQVPKYLKELGAHIEVKTLDVGDYIVSEDVAV
ERKSANDFIQSIIDGRLFDQVKRLTEAYARPVIIIEGQLYGIRNVHPNAIRGALAAVTID
WGVPILFSTDAKETAQFIYLIAKREQEERKKEVAVRSEKKALTLADRQRLIVEGLPYVSA
TLAKRLLRHFGSVERVFTAKENELMEVEGIGEKIAREIRRVITAPYLEEE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacggagagatttaatccaacctcgtgtctatcaggaagtcatctatgccaag
tgtaaggataagaatagcttaattgttcttccaactggtttaggaaaaacactcattgca
atgatgattgctgattatagactgtcaaaatacggtggaaaggttttaatgctcgcccct
acaaagcctcttgctcttcagcacagagaaagcttcgttaggctttttaacctgccaccc
gaaaaaatcaacgttttaactggtgagcttccaccggagcaacgagccaaaatctgggag
aggagcataataatcacggcaactccccagacgactgaaaatgatctccttgttgggaga
ataagcttagaagatgtcgttctgcttgtatttgatgaagcccatagggctgttggaaac
tatgcatatgtttacattgccaaagaatacatgcagcaggcaaagcatcccctcattttg
ggtctaaccgcctcaccaggtaatgatgaggaaaaaataagacaagttctaaaaaatttg
tacattgagcatgtcgaagtgagaactgaaagctctccagatgttagaccttatgtccaa
ggtatcagatttgagtggattaaagttgaactgcccgggatttacaaggaagttcgaaag
ctcctgagggaaatgcttaaagataccctaaaacctttggctgaagctggcttggttgat
tcctactctccagacataccaaagaaggacgtcctcaaagcggggcaaataatcaatgct
gaagttgcaaaaggtaattatgaaattggaaagctcatgctacatcaagctaaagctatg
aaactccaccatgccattgagcttttggagacacagggattaacagcactaagggcatat
ctaaaaaggctttacgaagagaggcagacaaaatcaaacaaagagctcatgagtgatccg
agaatgaagaaggcagtatcgcttctaattcaagccagagatttggggttggatcatcca
aaaatggacaagctaaaagaactcatcaaagagcagcttgagaaaaaaccaaactcaaaa
ataatcgttttcacgaactatagagacactgcaaagaaaatagttaaagagttagttgat
atggggattaaagtttcacgcttcgttggacaagcaagcagagagaatgacaggggaatg
agccagaagaaacagaaagaaattcttgacctcttctctcaagggatattcaacgttctg
gtggccacaagtgttggtgaagagggtttggatgttccagaagtggatttggttgtgttc
tacgaaccagtaccctcagcaatcaggagcatacaaagaagaggaagaaccggaaggcac
aagcctggcagagttgtgattttaatggcaaaagggacgagggacgaagcatactactgg
agttcaagacacaaagaaaagcaaatgattgccgtccttaagaaggtgagtgagatgatt
aaaaaagaaaaacaagcctcccttttgggatttgtcaagcctaaaaaggaggaagaaaaa
gaggagattactgctgaagaagagaaagaacagcggaaagccgaagtttcaaaggaggag
gtttatgggaaacttccagttaggccaatttttgtgaaaaagcctaaaggaattgttatc
tatgttgattcccgcgagctgaagagtcaagtgcctaagtatcttaaggaacttggagct
cacattgaagtcaaaactctggatgtcggtgattacatagttagtgaggatgtagctgtt
gagagaaagtcagcgaatgatttcattcaatctataattgacggtcgtctctttgaccaa
gtgaaaaggttaacagaggcatatgcgaggcctgtgataatcattgaggggcagctttat
gggattaggaatgttcatcccaatgcaattagaggggctttagctgccgtaaccattgat
tggggcgtgccaatcctattttctactgatgctaaggagacagcacagttcatctactta
atcgcaaagagagagcaagaggagaggaaaaaggaagttgctgtaaggagcgagaagaag
gcgttgactttggcagataggcagaggctaatagttgaaggcttgccctatgtctcagca
actttagcaaagcgtttgcttaggcattttggaagcgttgaaagggttttcacagcaaaa
gaaaacgagctcatggaagtcgaaggcattggagagaaaatagcaagggagattagaaga
gtaataacagccccgtacttggaggaggagtag
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