Thiobacillus denitrificans: Tbd_0469
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Entry
Tbd_0469 CDS
T00275
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tbd_0469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0469
Enzymes [BR:
tbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tbd_0469
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tbd_0469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_dom3_C
RecG_wedge
ResIII
SecA_DEAD
Helicase_RecD
AAA_30
SLFN-g3_helicase
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAZ96422
UniProt:
Q3SLI8
LinkDB
All DBs
Position
complement(491230..493266)
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AA seq
678 aa
AA seq
DB search
MKTASPFSFPVSPALAAKLAKLGLKRDSDLILHLPLRWEDETRITPIGELLPGQTAQVQA
CVREAKVTYRPRRMLTLIVEDDSGVLGVRFLHFYPSHLKAFQAGARFRFNGEVRGGFLGL
EMVHPRFAKADDDTPLPAGLTPVYPTTAGLGQASLRKLIERALAAPIDETLPPEWREELG
LAELESSIRLLHQPPPGCAQHALESRAHPAWQRLAFDELLAQQLSLATSRQAREARTTLP
LPHRRRLTAAFVDTLAFELTAAQARAWQEISTDLAAPHPMRRLLQGDVGSGKTVVAALAC
LQAVENGMQAAFMAPTEILAEQHYRKLAPTLAALGVRSGWVSGSQRRAEREAAWRAIAAG
EADLAFGTHALFQEAGNFCRLGLVVVDEQHRFGVGQRLALMGKGTEPHQLMMSATPIPRT
LAMSFFADLDVSAIDELPPGRTPIVTKLVSAARRDEVLARVRDACVGGGQAYWVCPLIEE
SEKLQLQTAEDTYGTLVEQLPGLRIGLVHGRLKAEDKQSVMAAFQSHEIDLLVATTVIEV
GVDVPNAALMVIEHAERMGLAQLHQLRGRVGRGARESVCVLLYETPLSELARARLKVIFE
HSDGFEIARQDLLLRGPGELLGQRQSGLPMLRFADLERDVALLERARDLAQRCLRERPEV
AARHVERWLGSRQAYSGS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacggcttcgccgttttcctttccggtcagtccggcgcttgcggccaagctcgcc
aagctcggtctcaagcgcgacagcgacctgatcctccacctgccgctgcgctgggaagac
gaaacgcggatcacgccgatcggcgaactgctgccgggacagaccgcgcaggtgcaggcc
tgcgtgcgcgaagcgaaggtcacctatcgtccgcggcgcatgctgacgctgatcgtcgag
gacgacagcggcgtgctcggcgtccgcttcctgcacttctatcccagccacctcaaggcg
ttccaggccggggcgcgcttccgcttcaatggcgaagtccgcggcggcttcctcggtctg
gagatggtgcacccgcgtttcgccaaggccgacgacgacaccccgctgccggccgggctg
acgccggtctacccgacgaccgccggactcggccaggcgagcctgcgcaagctgatcgag
cgcgcgctcgccgcgcccatcgatgagacgctgccgcccgaatggcgcgaagaactgggc
ctcgcggaactggaatcgagcatccgcctgctgcaccagccgccgcccggctgcgcgcag
catgcgctcgaatcgcgcgcccaccccgcctggcagcggctcgccttcgacgaactgctg
gcgcagcagctgtcgctggcgacgtcccgccaggcgcgcgaggcgcgcacgactttgccg
cttccgcaccggcgccgcctgaccgcggccttcgtcgacaccctcgctttcgaactgacc
gcggcgcaggcccgcgcctggcaggaaatcagtaccgacctcgccgcgccgcatccgatg
cgcaggctgctgcagggcgacgtcggcagcggcaagaccgtggtcgcggcgctcgcctgc
ctgcaggcagtcgagaacggcatgcaggccgcgttcatggcgccgaccgagatcctggcc
gagcagcactaccgcaagctcgcgccgacgcttgcggcgctcggcgtgcgcagcgggtgg
gtttcgggcagccagcgccgtgccgaacgcgaagccgcgtggcgcgcgatcgccgccggg
gaggccgacctcgccttcggcacgcatgccctgttccaggaggccggaaacttttgccgg
ctcggcctcgtcgtcgtcgacgaacagcaccgcttcggcgtcggccagcgccttgcgctg
atgggcaaaggcaccgagccgcaccagttgatgatgagcgcgacgccgattccacgcacg
ctcgcgatgagctttttcgccgacctcgacgtctcggccatcgacgaactcccgcccggg
cgcacgccgatcgtgaccaagctggtcagtgccgcgcgccgcgacgaggtgctcgcccgt
gtgcgcgacgcctgtgtgggcggcggacaggcctactgggtgtgcccgctgatcgaggaa
tcggagaagctgcagctgcagaccgccgaggacacctacggcacgctcgtcgagcagctg
cccgggctgcgcatcggcctcgtgcacggccggctcaaggccgaggacaagcaatcggtc
atggcggcgttccagtctcacgagatcgacctgctcgtcgcgacgaccgtgatcgaggtc
ggcgtcgacgtgcccaacgcggcgctcatggtgatcgagcacgcagagcgcatggggctc
gcgcaattgcatcagttgcgcgggcgggtcgggcgcggcgcccgcgaatcggtgtgcgtg
ctgttgtacgagacgccgctgtccgaactcgcgcgggcgcggctcaaggtgattttcgaa
cacagcgacggcttcgagatcgcgcgccaggatctgctgctgcgcggaccgggcgagttg
ctcggccagcggcagagcggtctgccgatgctgcgtttcgccgacctcgagcgcgatgtc
gccttgctcgagcgcgcgcgcgacctcgcgcaacgctgcctgcgcgagcgccccgaggtc
gccgcgcgccacgtcgagcgctggctcggaagccgccaggcctacagcggaagctga
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