KEGG   Trematomus bernacchii (emerald rockcod): 117468533
Entry
117468533         CDS       T09643                                 
Symbol
ubqln4
Name
(RefSeq) ubiquilin-4
  KO
K04523  ubiquilin
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117468533 (ubqln4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117468533 (ubqln4)
   03051 Proteasome [BR:tben03051]
    117468533 (ubqln4)
Membrane trafficking [BR:tben04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    117468533 (ubqln4)
Proteasome [BR:tben03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    117468533 (ubqln4)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD UBA Ubiquitin_5 UN_NPL4 OTU1_UBXL YukD STI1-HOP_DP Dsc3_N HOIP-UBA Rad60-SLD_2
Other DBs
NCBI-GeneID: 117468533
NCBI-ProteinID: XP_033968606
EnsemblRapid: ENSTBNG00005015963
LinkDB
Position
Unknown
AA seq 371 aa
MADNSNTDRTEDDNMDNTVASGGSMMVITVKTPNGKEDISISEDSSVSEFKQEVSKKFEA
QQDQLVLIFAGKILKDGDPLKQHGIKDGLTVHLVIKTVPKSTGDGPSQTSSNYGNPPSYS
SITTNPTVADRAEGGMSQTPTQTANPMGGLGDLSGLLGLGMGSSSFMEMQQQVQSQLMSN
PTMLTQMMGNPMVQNMMSNPDLMRQVLAGNPQMQNLMDSNPDVSSMFNNPELMRRIQSPE
TLSMLTNPRAMQALTQIQQGLQTLQTEAPGFLSRLSPGGLTVPPVTGGSIPQVNPQPPAM
TTASSPSQQQLMQQMLQMFSEGGPSLQGPEDRFRHQLEQLNTMGFVDRAANLQALNATGG
DLNAAIERLIN
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggccgacaatagcaacacagatcgcacggaggatgacaacatggataacactgttgct
tcaggaggatctatgatggtgatcactgtcaaaacccccaatggaaaagaggacatttct
atatcggaggactcttctgtctcagagttcaaacaggaggtatccaaaaagtttgaggcc
cagcaggaccagctggtgttgatatttgctggaaagattctgaaggatggtgatccttta
aagcagcacggtatcaaagacgggttaactgttcatcttgtcatcaagactgtcccaaaa
tcaacaggtgatggcccatctcagacaagttccaattatggaaaccctccaagttacagc
agcatcaccacaaaccccactgtagcggacagagcagagggtggcatgagtcagactcca
acacaaactgctaatccaatgggtggactcggggacctttctggcctgttgggtctgggc
atgggttcgtccagcttcatggagatgcagcagcaggtgcagagtcagctgatgtctaac
ccaacgatgctgacgcagatgatgggcaaccccatggtccaaaacatgatgtccaaccca
gacctgatgagacaagtgttagcaggcaatcctcagatgcagaatctcatggacagtaac
ccggatgtctccagcatgttcaacaaccctgagctcatgagacggattcagagtccggag
acactgtcaatgctgaccaaccccagagccatgcaggccctcacccagatccagcagggc
ctgcagaccctacagacagaagcccccgggttcctgtccagactgtctcctggaggtctc
acagttcctccagtcacagggggcagcatcccccaggtgaaccctcagcctcctgccatg
acaacagcatccagtccctctcagcagcagctcatgcagcagatgttacagatgttctca
gagggcgggccatcacttcagggcccagaggatcggttcaggcaccagctagagcagctc
aacaccatgggcttcgtcgaccgcgcagccaacctgcaggcgctcaacgctacaggaggg
gacctcaacgccgccatcgagagacttataaattaa

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