Trematomus bernacchii (emerald rockcod): 117468785
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Entry
117468785 CDS
T09643
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117468785 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117468785 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117468785 (usp16)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117468785 (usp16)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117468785 (usp16)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117468785 (usp16)
BRITE hierarchy
Motif
Pfam:
UCH
zf-UBP
UCH_1
Alveol-reg_P311
Motif
Other DBs
NCBI-GeneID:
117468785
NCBI-ProteinID:
XP_033968951
EnsemblRapid:
ENSTBNG00005022585
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MGKKRGKDKSSREEDDFEITVPSCRHIKKGSDQTLLKKLSGSGDWTSCQDCKPEENEENK
ENISTTVPPESEEEKEMEPMWMCLKCGHRGCGRNSENQHAIKHYETPRSEPHCLVISLDN
WSVWCYICDDEVQYSRTGHLAQLLTNLKKQTSADPIKRPQKRVKEEACLLEVEQKTETVK
AEEKEDKENEDNKENKDHPKKNAKKESVVKSQKSGTSEDIGGISVRGLSNLGNTCFFNSV
IQNLSQTHLLRQTLNKMTEEKIELNIQPVASSDLEPLVLHLDRPGPLTMAMCQLLNEIQE
SKKGVVTPRELFSQVCKKAARFKGFQQQDSQELLRYLLDGMRAEETKRVSTGIMEALKGS
KKSTDGEQLKTLVKEYEKNGFPKNVVDHVFGGETTSTIMCQQCKTVSVVTEMFLDLSLPV
SDEAYRKKKQKKEVQSTSESSQDGRNSPALTNGNDDIPEGSGSKYQQKKAKKQAKKQAKQ
QKRQTKLDGRVTLDCLSSPSQTESEPTDPGAEDGENADNGTNEEATLIGETPAQISVSEE
DQKTLETDQDEKKKEKEEEEEDDDLVNECDSSATSSVSNRFTALSEEQPSEEQPSEDSVL
DNDKISDMDQEVEQDTELVSEMEKVTLDDAFIEDPLAVDQSMESEEEEAKEYTVVSQDPD
LAFHTLATRKAPEKQECSVQSCLFQFTEVETLTQNNSLLCVTCTKRQPNKEKAGASKKNV
YTDALKQMLISSPPPVLTLHLKRFQQNGYSICKVNRHVQFPLILDLAPFCAVKCKNLTEG
DNQILYSLYGIVEHSGTMRSGHYTAYVKARPECPKLSSNGCTAEDSTRGSWFHVSDTSVQ
PVSESKVQGCQAYLLFYERIL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaagggggaaggacaaaagctccagagaggaagatgactttgagattaca
gttccatcctgtaggcacattaagaagggatcagaccaaactcttctaaagaaactctct
gggagtggtgattggacaagttgccaggattgtaagcctgaagaaaatgaagaaaacaaa
gaaaacatcagcaccactgtgccaccggaatctgaagaggaaaaagagatggaacccatg
tggatgtgcttgaaatgtggccatagaggatgtggacggaactctgaaaatcagcatgcc
atcaaacattatgagactcctcgttccgaaccacattgtctggtgatcagtttggacaac
tggagtgtgtggtgttacatatgtgatgatgaagtccagtactccagaacgggacatttg
gctcagctgttgaccaacttaaaaaagcaaacctctgcagatcccataaagagaccacag
aagagagtgaaggaagaagcctgcttgttggaagttgaacagaagacagagactgtaaaa
gcagaggaaaaagaggacaaagagaacgaagacaacaaagagaacaaggaccacccaaag
aaaaacgccaagaaagagagtgttgtgaaatcacaaaagtctggcacatctgaagacatt
ggtggtatttcagtaagagggctgagcaaccttggaaacacatgtttctttaattcagtt
attcagaatctttctcaaacacatctcttaagacagactctcaacaaaatgacggaagag
aaaatagaacttaacatccaacctgttgcgtcctctgatctggagcctctcgtattgcat
ttagatcggcccggacccctgactatggctatgtgtcaactactcaatgagatccaggaa
tccaagaagggtgtggtaacaccgcgggagttgttctcacaagtttgtaaaaaggctgcc
aggttcaaaggttttcagcagcaagacagccaggagctgctgcgctaccttctggatggg
atgcgagctgaggagaccaaaagagtgagcacagggatcatggaggcattgaaaggatct
aaaaaaagtacagatggagagcagctgaaaacactagttaaagagtacgagaaaaacgga
tttccaaaaaacgttgtcgaccacgtttttggtggggaaacgaccagcactataatgtgt
cagcaatgcaaaacggtgtctgtagtcacagagatgtttttggatctttcccttcctgtc
tctgatgaggcatacaggaagaagaaacagaaaaaagaagttcagagcaccagtgaatcg
agtcaggatggcagaaacagccctgctttgactaacgggaatgatgacattcccgagggg
tccggcagcaagtaccagcagaaaaaagccaagaagcaggcaaagaagcaggcaaagcaa
cagaagaggcagacgaagcttgacggcagagtcactttggactgtctctcatctccgagc
caaacggagagcgaaccgactgatccaggtgcagaggacggggaaaacgctgacaatgga
acaaatgaggaagccacactaattggagaaactcctgcacaaatcagcgtgtctgaagag
gaccagaaaaccctcgaaacggatcaggatgagaagaaaaaggaaaaagaagaagaagaa
gaggatgatgatttggtgaatgagtgtgactcatccgctacgtcatcagtaagcaaccgc
tttacagccttatcagaggagcaaccctcagaggagcaaccctcagaggacagcgtcttg
gacaatgacaaaatatctgacatggatcaggaagtagaacaggacacagagctagtgagc
gaaatggagaaagtaaccctggatgatgccttcattgaagatcctcttgctgtggatcaa
agcatggagagtgaagaagaggaagctaaagagtacactgtagtaagtcaggacccagat
ctggctttccacactctggctaccaggaaagcacctgagaaacaggagtgttcagtccag
tcgtgccttttccagttcacagaagtggaaactctcacgcagaacaacagcctgctttgt
gtcacctgcaccaaacggcagcccaataaagagaaagctggagcatccaagaaaaatgtc
tacactgatgccttgaagcaaatgcttatctcgtctcccccaccggtgcttacccttcat
ttgaaaagatttcaacagaatggatacagtatttgtaaggtgaacagacatgtccaattc
cccctgatactggatctagctcccttctgtgcggttaaatgcaagaacttgacagaggga
gataatcagattttgtacagtttgtacggcatcgtagagcacagcgggacaatgaggtca
ggtcattacacagcgtatgtgaaagcacgacctgagtgccctaaactctcatccaatgga
tgtacagctgaagattcaaccagaggatcctggttccatgtcagcgacacaagcgttcag
cctgtgagcgagagcaaagtgcagggttgccaagcctacctcctcttctatgaaagaatc
ctctaa
DBGET
integrated database retrieval system
