Trematomus bernacchii (emerald rockcod): 117469679
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Entry
117469679 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117469679
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117469679
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
Gp58
RSS_P20
MRP-S31
WDCP
BshC
Motif
Other DBs
NCBI-GeneID:
117469679
NCBI-ProteinID:
XP_033970032
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMDCIKHHWDGELIHSCPQCRRSFTP
RPVLLKNTMLAALVEKMKKTGLQAAPADHCYAGAEDVACDVCTGRKLRACKSCLVCLASY
CDKHLQGHYDVGPLKKHKLVEPSKKLQENICSRHDEVIKMFCRTDQQCICYICNMDDHKG
HDTVSAAAERTERQRELEGSRQNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSEKMF
TELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTEDHN
QFLHSYPSLSALSEPTYSSSINIRPLRYFEDVAAALSAVRVKLQDVLREEWTNISSSEVD
VLLSAAEPTTRAGFLQYSQRITLDPNTANTYLLLSEGSRKATFMKQYQSYSSHLDRFTAW
PQVLSRESLTGRCYWEVERREQGVRVAFTYKNISRAGVGTECKFGYNDKSWSLDCNQNSY
SFLYNSIITPVSGPQSSRVGVYLDQRAGILSFYSIVSETMTLLHRSQTTFTQPLHAGLWL
YYGATAELCKLK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaaaggagttcagctggaccgggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtcactattccctgtggacacagctactgcatggactgtattaaa
caccactgggatggagagctaatccacagctgccctcagtgtagaaggagcttcacaccg
aggcctgtcctgctgaaaaacaccatgttagcagctttagtggagaagatgaagaagact
ggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggagaaaactgagagcctgtaagtcctgcctcgtgtgtttggcctcttat
tgtgacaaacacctccagggtcattatgacgtaggtccattaaaaaaacacaagctggtg
gagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtgataaagatg
ttctgccgcactgatcagcagtgtatctgttatatctgcaatatggatgaccataagggc
cacgacacagtgtcagctgcagcagagaggactgagaggcagagggagctggaggggagt
cgacaaaacatccagcagagaatccaggacagagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgagaagatgttt
actgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcaggtcagatcc
cagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
tctgagttgaagaggagagacgctgagctgaagctgctgtctcacacagaggatcacaac
cagtttctgcacagctacccctcactgtcagccctcagtgaacctacatactcatccagc
atcaacatccgtcctctgcgctactttgaggacgtggcggcggccctgtcagcagtcaga
gtcaaactacaggacgtcctgagagaggaatggacaaacatctcatcgtctgaagtggat
gttttactgtcagcagcagagcccaccaccagagctgggttcttacaatattcacagaga
atcacactggatccaaacacagcaaacacatatctgttattatctgaggggagcagaaaa
gcaacattcatgaaacaatatcagtcttattccagtcacctagacagattcactgcatgg
cctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagcggaga
gagcaaggagttcgtgttgcattcacatacaagaatatcagccgagcaggggtggggact
gaatgtaaatttggatacaatgacaaatcttggtctttagattgtaaccaaaacagttat
tcatttctttacaacagtatcatcactcccgtctcaggtcctcagtcctccagagtagga
gtgtacctggatcaaagagcaggtattctgtccttctacagcatcgtctctgaaaccatg
actctcctccacagaagccagaccacattcactcagccgctacatgctggactttggctt
tattatggagccacagctgagttgtgtaaactgaaatag
DBGET
integrated database retrieval system