Trematomus bernacchii (emerald rockcod): 117469681
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Entry
117469681 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117469681
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117469681
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Prok-RING_4
DUF445
Gp58
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117469681
NCBI-ProteinID:
XP_033970034
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMDCIKHHWDGELIHSCPQCKQSFTP
RPVLLKNTMLAALVEKMKKTGLQAAPADLCYAGAEDVACDVCTGRKLRACKSCLMCLASY
CDKHLQRHYEVGPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQKCICYICNMEEHKG
HNTVSAAAERTERQRELEGSRQNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEYSEKMF
TELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTEDHN
QFLHSYPSLPALSEPTHSSSINIRPLRYFEDVTAALSAVRDILQDVLREERTNVSSTEVD
VLLSAAEPTTRAGFLTYSQGITLDPNTANTELLLSEGSRKATYMEKHQCYSSHPDRFTFY
EQVLSRESLTGRCYWEVEWRGRGVFVAVTYKNISRAGGGNECRFGFNDKSWSLDCKQNSY
TFLYNIIRTPVSGPLSSRVGVYLDHRAGILSFYSISETMTLLHRVQTTFTQPLHAGLFLC
YGATAELCKLK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagcttgaccgggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtcactattccctgtggacacagctactgcatggactgtattaaa
caccactgggatggagagctaatccacagctgtcctcagtgtaagcagagcttcacaccg
aggcctgtcctgctgaaaaacaccatgttagcagctttagtggagaagatgaagaagact
ggactccaagctgctcctgctgatctctgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggagaaaactgagagcctgtaagtcctgcctcatgtgtctggcctcttat
tgtgacaaacacctccagcgtcattatgaggttggtccattaaaaaaacacaagctggtg
gagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtgatgaagatg
ttctgccgcactgatcagaagtgtatctgttatatctgcaatatggaggaacacaaaggc
cacaacacagtgtcagctgcagcagagaggactgagaggcagagagagctggagggaagt
cgacaaaacatccagcagagaatccaggacagagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtggagtacagtgagaagatgttc
actgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcaggtcagatcc
cagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
tctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagaggatcacaac
cagtttctgcacagctatccctcactgccagccctcagtgaacctacacactcatccagc
atcaacatccgccctctgcgctactttgaggacgtgacggcggccctgtcagcagtcaga
gacatactacaggacgtcctgagagaggaaaggacaaacgtctcatcgactgaagtggat
gttttactgtcagcagcagagcccaccaccagagctgggttcttaacatattcacaggga
atcacactggatccaaacacagcaaacacagagctgttattatctgaggggagcagaaaa
gcaacatacatggaaaaacatcagtgttattctagtcacccagacagattcactttttat
gagcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagtggaga
gggagaggagtttttgtagcagtcacatacaagaatatcagcagagcagggggggggaat
gaatgtagatttggattcaatgacaaatcttggtccttagattgtaaacaaaacagttat
acatttctttacaacattatccgcactcccgtctcaggtcctctgtcctccagagtagga
gtgtacctggatcacagagcaggtattctgtccttctacagcatctctgaaaccatgact
ctcctccacagagtgcagaccacattcactcagccgctacatgctggactttttctttgt
tatggagccacagctgagttgtgtaaactgaaatag
DBGET
integrated database retrieval system