Trematomus bernacchii (emerald rockcod): 117469902
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Entry
117469902 CDS
T09643
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117469902 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117469902 (rsf1b.1)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
117469902 (rsf1b.1)
BRITE hierarchy
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
117469902
NCBI-ProteinID:
XP_033970263
EnsemblRapid:
ENSTBNG00005004030
LinkDB
All DBs
Position
Unknown
AA seq
1908 aa
AA seq
DB search
MAASAATASSSPGLCPNYAVICSFLERYGALLDLPELTFPQLERYLRDTSSAEAVPKLLV
DLHVKLLRKIGKSVSADRWEKYLLKVCQELNPTWAWEFEQNGYKDLSTECKTGLLKYLCE
CQFDDNVKFKTAINEEDPDKMRLQPIGRDKDGQMYWFQLDQSDNVRLYIEEQDDLDGSSW
KCIVKDRNDLAEVVALLKTQIDPALLKRDEEIKAAAEEGKEKTDGEVKKIEDSSDEDIKD
KAAGQVSPKTENNENATENNEKATEKDDFKSETSLNGVIEEKPEAELNSEKPASDLSIIT
KVENIKEEPMEVSDTKSSNTATSEPASEVPCLSVKAEKGDEAKKTEEIQQALKNDQQAKI
PLKKRGMKFSEDFEKHSGIIVQNPSVSQLKEAPKADSILDQSKKAQSVNDHVNGEVASAK
SHLSESLKDAASCSNHKEQEPIKATKDSCTEDKALKETDKTLATGESEKHTSKEVQSKDL
EERTASVDASKSSKAEETKTKPTERSEDKEKATCEANVEKSDKSAEKEKQGVIKTSDKDH
AKKSAESEKAASTSVVKNTEKLKESDNAESKEATKSLKKAEISDESDTVESPVIKKLDKS
CKLGEKQDEDKKQQKASETDTEKPEDVKKAVNCEDVPMHDVSKISDSVEVEAVAVKPDVT
KPQEDDKTEINSVASKEKKGDTSAWKDKPCSDVEKINVPKETERMDKGKMSEEQAKKMEA
ECPSSGSKKDADLEKRKDTEIRNKKVTDLEKMTESAQKKDTDEEMKMDTDMENRKETGKQ
KDTESENKKDTDVEKRKETYLEKRKDTDLEKRKDTDLEKRKDTNLEKRKDTDLEKRKETD
LEKRKDTDLEKRKETDTDKKKDTDLEKRKDTDLEKRKDTDLEKRKDTDLEKRKDTDLEKR
KKTDTDKKKDTDLEKRKDTDLGKRKDTDLEKRKEIDLGKKKDTDLEKRKDTDLEKRKDTD
LEKRKDTDLEKRKETESAKKMETNLEKRKETDLEKKKVTDLEKRKDTDLEKKKETDTDKK
KDTDLENRKDTDLGKKKETDLEKRKETDTDKKKDTDLEKRKETDLEKKKETDLEKRKETE
SENKKDTELKKKETDTDKKKDTDLGKRKDTDLEKRKDTDLEKKKDTDSGKTPETENKKDS
ESSTETEKASDPSKEPDTEKPAEEEGKSDEDDEEAPKKEVANGRGTPASRRRSKRPAHRR
KAVLQRAERQDSESDTNTGMSLRRSPRISRPTSKAVEIQEKKPEKSAPQADKSDDDEKGE
KAKDQEEGEEEEEEEEEKAVQKKPREKKPEQEGQTKPKGRKRRRVRWSNTRTRRKKKGSE
DEEENSEEESSAEEDTEEEDDSDEDYKVERRKRRRNRNRERRESDTSTSSDDDLPPNDDP
CKHCGLPSQPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCSPCQHKLLYEKLEEQLLN
LDVALKKKERAERRKERLIYVGISLENIITPGVSTVEEEKPEIIIKEKKEAKKSKSWGRR
STRTKKSISYRFDEFDEAIEEAIEEDIREAEGGGAGRGKDMANITGLRGKDMSVILQADE
GKENGETPQPPAGPRRKKRRRLNDLDSDSTVEEEESEDEFRISESSEEEFVASENGSEAE
SDSSSGKKRTSKRRKPPTKRRRSARKRRRPKGYSDDEEEETDEEDEDEMATEGSSEYSDS
DLDMSRRRSRRSKKAQVNYRETSESEASQAETNQAKMKPRGRMNSSSSEASSSKDSEEES
KEPRRKRRGDSSSEEEKGSKQKHRRIALKRRRASEDDESDDDSDASSSEEDRPVRKRVNR
IDSDDDEEEEEEKKEEKEEKKEEEEKPKEKKADEETKGTVDSTPVDLPPTNGQNAIKTIV
TPTEAPKNITAGAIVAPNGQEVAPQEEDEDDLLGVTDLVDYVCNSEDL
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcaacggcgagttcttcccccggtttgtgtccaaattacgccgtg
atttgctctttcctggagcgctacggagctctgttggacttaccggagctcaccttcccg
cagctggagagatatctacgggacacatcctcagctgaggccgttccaaagctgctcgtt
gatcttcacgttaagttgctgaggaaaatcggcaaatctgtgtcagcggacagatgggag
aaatatctactgaaggtatgtcaggagttgaacccaacgtgggcatgggagttcgagcag
aacggatacaaagatctgtcgacagagtgcaagacggggttacttaaatatttgtgtgag
tgtcagttcgatgacaatgttaagttcaaaacggccatcaacgaggaggacccggataag
atgcgcctgcagccgatcggacgcgataaagacggtcagatgtactggttccaactcgac
cagagcgacaacgtgcggctgtacatcgaggagcaggacgacctggacggatcctcctgg
aagtgcatcgtcaaagacagaaacgacctggcggaggttgttgctcttctgaaaacacag
atcgaccccgcgctgttaaaaagagacgaggaaattaaagctgcagctgaagaggggaaa
gagaaaacagacggtgaagtcaaaaaaatcgaggactcttcagatgaagatatcaaagac
aaggctgccggtcaagtctctccgaagacagagaataatgagaacgcaacagagaataat
gagaaagcaacagagaaagacgactttaaatcagaaacgtctctgaatggcgtcatcgaa
gaaaaacctgaagctgagttaaattcagaaaagcccgcctcggatctcagcatcattaca
aaagttgagaatatcaaagaggaaccgatggaggtgtcggacacgaaatcaagcaacacg
gcaacaagtgaaccggcctctgaggtgccttgtttatcagtgaaggcagagaaaggagac
gaggcgaagaagaccgaggagattcaacaagctctgaagaacgaccaacaggctaaaatc
cccctgaagaaaaggggaatgaagtttagcgaagactttgagaaacatagtgggatcata
gttcaaaacccgtctgtttctcagctcaaagaagctcccaaagccgactccattctcgat
cagagcaagaaagcgcagagtgtaaacgatcatgttaatggggaagttgcgtcagcgaaa
agccatttgagcgagtccctaaaagacgccgcatcctgctctaatcataaagagcaggaa
ccaataaaagctacaaaagactcgtgtacagaagacaaagcattgaaagaaactgataaa
acattagcgactggtgagtcagagaaacacacgtcgaaagaagttcaatcaaaagatttg
gaggaaagaacagccagtgttgacgcatcaaagtcaagtaaggctgaggaaaccaagacg
aagccaacggaaaggagtgaggataaagaaaaggcgacttgtgaagcgaatgttgagaaa
tcggataaatcagcggagaaagaaaagcaaggggtcattaaaacatcagacaaagatcat
gcaaagaaatcagctgaatcggaaaaggctgcatcaacttcagttgtgaaaaatacagaa
aaactcaaagaaagtgataatgcggaaagtaaagaagccacaaaaagtcttaaaaaggca
gaaatcagtgacgaatcagatactgtggagtctcctgttattaaaaagcttgacaaatcg
tgtaaacttggcgaaaagcaagatgaagacaagaagcaacagaaagcctctgagactgac
acggaaaagcctgaagacgtgaagaaagctgtcaactgtgaagacgttccgatgcacgat
gtctccaagataagcgactccgtggaggtggaagcagtggccgtaaaacccgatgtgaca
aagcctcaggaggacgacaaaactgagattaactcggttgcatctaaggagaagaaaggg
gacacgtctgcatggaaagataaaccgtgcagtgatgtggagaagattaacgtccctaaa
gaaactgagagaatggataagggaaagatgtctgaagaacaggctaagaaaatggaggcg
gagtgtccgtcatcaggaagtaaaaaggatgcagacttggaaaagagaaaggacacggag
attagaaataaaaaggtcacggatttggaaaagatgacggaatcggcacagaaaaaggac
acagacgaagaaatgaaaatggacacagatatggaaaatagaaaggaaactggaaagcaa
aaagacacagagtccgaaaataaaaaggacaccgacgtggaaaagagaaaggagacatac
ttggaaaagagaaaggacacagacttggaaaagagaaaggacacagacttggaaaagaga
aaggacaccaacttggaaaagagaaaggacacagacttggaaaagagaaaggagacagac
ttggaaaagagaaaagacacagacttggaaaagagaaaggagactgacacagacaagaaa
aaggacacagacttggaaaagagaaaggacacagacttggaaaagagaaaagacacagac
ttggaaaagagaaaggacacagacttggaaaagagaaaagacacagacttggaaaagaga
aaaaagactgacacagacaagaaaaaggacacagacttggaaaagagaaaggacacagac
ttgggaaagagaaaggacacagacttggaaaagagaaaggagatagacttggggaaaaaa
aaggatacagacttggaaaagagaaaggacacagacttggaaaagagaaaggacacagac
ttggaaaagagaaaggacacagacttggaaaagagaaaggagacggaatccgcaaagaaa
atggagacaaacttagaaaagagaaaggagactgacttggaaaagaaaaaggtcacagac
ttggaaaagagaaaggacacagacttggaaaagaaaaaggagactgacacagacaagaaa
aaggacacagacttggaaaacagaaaggacacggacttaggaaagaaaaaggagacggac
ttggaaaagagaaaggagactgacacagacaagaaaaaggacacagacttggaaaagaga
aaggagacagacttggaaaagaaaaaggagaccgacttggaaaagagaaaggaaacggaa
tctgaaaataaaaaggacactgaattaaagaaaaaggagactgacacagacaagaaaaag
gacacggacttaggaaagagaaaggacacagacttggaaaagagaaaggacacagacttg
gaaaagaaaaaggacacagactcgggaaagacaccggaaaccgaaaataaaaaagacagc
gaatcctcaacggaaacggagaaagccagcgacccgagcaaagaaccggatactgaaaag
ccggctgaggaagaaggtaaaagcgatgaagatgacgaggaggcaccgaaaaaagaggtg
gcgaacggcagaggaactccggcttcacgacgaagatcgaaacgtccggcgcatcgaagg
aaagccgtgctgcagagagcagagaggcaggattcagagtcggatacaaacaccgggatg
tctctccgaagatctccaaggatctcaagacccacgtctaaagcggtggagatccaggaa
aagaaaccggagaaatctgctccacaggcggacaagagcgacgacgacgaaaagggcgag
aaagcaaaagaccaggaagaaggagaggaggaggaggaagaggaagaggagaaagctgtt
cagaagaaaccgagggagaagaagcccgagcaggagggtcagaccaaacctaaggggagg
aagaggcggagggtccggtggtccaacacgagaacgcgccgtaaaaagaaaggctccgaa
gacgaagaggaaaacagcgaagaggagtcgagcgccgaggaggacactgaggaagaggac
gacagcgacgaagattacaaggtggagcgacgcaaacggagacgcaatcgaaaccgagag
agacgagaatcagacacctcgacctcctcagacgacgatttacctccaaacgacgacccc
tgcaaacactgcggcctcccaagccaaccagagctgatcctcctgtgtgattcctgtgac
agcggataccacacggcctgtttgagaccgccgctcatgatcatccccgatggagagtgg
ttctgttcaccctgtcaacacaagctgctctatgagaagttggaggagcagctcctgaac
ctcgacgttgctctgaagaagaaggaacgagcggagagaaggaaagagcgtctcatttac
gttggcatcagtcttgaaaacatcatcacgcccggagtaagtacagtggaggaggagaag
ccggagatcatcatcaaagagaagaaggaggcgaagaagagtaagagctggggacgaaga
tctaccaggacgaagaagtccatcagctacagatttgatgaatttgacgaggcgatcgag
gaggcaatcgaggaagacatcagagaagcggagggcggaggagcgggtcgggggaaagac
atggcgaacatcacggggctccgagggaaagacatgtccgtcatcctgcaggcggacgag
gggaaagagaacggagaaacgccccaaccccctgctgggccgcggaggaaaaaacgccga
cgactgaacgacctcgacagcgacagcaccgtcgaggaggaggagagcgaggacgagttt
cgcatcagtgagagctcagaggaagagttcgtggcgtcagagaacggctcggaggcagaa
tcggactctagcagcgggaaaaaacgaacatcgaaacgcaggaaacctccgactaaacga
cgaagaagtgccaggaaacgaaggagaccgaagggatactcggacgatgaagaggaggag
acggacgaggaagatgaagacgagatggcgactgagggctcgagcgagtacagcgacagc
gatctggacatgagtcggcggcgctctcggaggagtaagaaggctcaggtgaactacaga
gagacgtcagagtccgaggcctcgcaggcggaaactaaccaggccaaaatgaaacccaga
ggacgcatgaacagctccagcagcgaggcgagttcctccaaagactcggaggaggagtcg
aaggagcctcggaggaagaggagaggcgactcttcgtcggaggaggagaaaggttcaaag
cagaagcaccggcgtatcgctctgaaacgcagacgagcctccgaggacgacgagtcggac
gacgactctgacgcatcgtcttcagaagaggatcgacccgtccggaaacgtgtgaaccga
atcgactctgacgatgacgaggaggaggaagaggagaagaaggaggagaaggaggagaag
aaggaggaagaggagaaaccgaaggagaagaaagcagacgaggagacaaagggaacagtg
gacagcactccagtggatttgccgcctacaaatggacagaacgcgataaaaaccatcgtc
acgccaacagaggctccaaaaaatatcaccgcgggcgccattgtcgcgccgaacggacag
gaagtggcgccgcaggaagaagacgaggacgacctgttgggagtcacggacctcgtggac
tacgtctgcaatagcgaagatttgtag
DBGET
integrated database retrieval system
