Trematomus bernacchii (emerald rockcod): 117470638
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Entry
117470638 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117470638
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117470638
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
U-box
TMEM106_N
RSS_P20
Nop16
Motif
Other DBs
NCBI-GeneID:
117470638
NCBI-ProteinID:
XP_033971343
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQKGVQLEREILSCSICLDLLKDPVSTTCGHSYCMKCIKGFWDGEDEKKLHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLMCL
ISYCDQHLQPHYESPAFEKHKLVEPSKKLQENICSRHHEVMKLFCRTDQQCICYICTVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLLSYPSLSALSEPTHSSSINIRPLSYFEDVTEALSAVRDKLQDVLREEWTNVSPT
EVEVLLSAAEPTTRAGFLQYSQEITLDPNTAHTRLLLSEGSRKATLVKQQQSYSRHPDRF
TGAYRQVLSRESLTGRCYWEVERRGGRVLVAVAYKNISRAGNESLFGHNDKSWSLYCHQN
SYSFYYNRITTHVSGPPSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAGVC
LWDNGATAEFSKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggagcgggaaatcttatcttgttccatctgtctggat
ctactgaaggatcccgtgagcactacctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggacggagaggatgagaagaagctccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgtcttatgtgtctt
atatcttactgtgaccaacacctccagcctcattatgaatcacctgcctttgagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcaccacgaggtg
atgaagctgttctgccgcactgatcagcagtgtatctgttatatctgcactgtggacgaa
cacaaaggccacgacacggtgtcagcggcagcagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagaagagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgctcagctacccctcactgtcagccctcagtgaacctacacac
tcctccagcatcaacatccgtcctctgagctactttgaggacgtgacggaggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggaggttttactgtcagcagcagagcccaccaccagagctgggttcttacaatat
tcacaggagatcactctggatccaaacacagcacacacacggctgttattatctgagggg
agcagaaaagcaacactcgtgaaacaacaacagtcttattctcgtcacccagacagattc
actggagcttatcgtcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagcggagagggggaagagttcttgtagcagtcgcatacaagaatatcagcagagca
gggaatgaaagtttatttggacacaatgacaaatcttggtccttatattgtcaccaaaac
agttattcattttattacaacagaatcaccactcacgtctcaggtcctccgtcctccaga
gtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtgcagaccacattcactcagccgctacatgctggagtttgt
ctttgggataatggagccacagctgagtttagtaaactgaaatag
DBGET
integrated database retrieval system