KEGG   Trematomus bernacchii (emerald rockcod): 117470638
Entry
117470638         CDS       T09643                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117470638
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117470638
Motif
Pfam: PRY zf-C3HC4_4 SPRY zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-RING_10 zf-RING_6 U-box TMEM106_N RSS_P20 Nop16
Other DBs
NCBI-GeneID: 117470638
NCBI-ProteinID: XP_033971343
LinkDB
Position
Unknown
AA seq 554 aa
MAQKGVQLEREILSCSICLDLLKDPVSTTCGHSYCMKCIKGFWDGEDEKKLHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLMCL
ISYCDQHLQPHYESPAFEKHKLVEPSKKLQENICSRHHEVMKLFCRTDQQCICYICTVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLLSYPSLSALSEPTHSSSINIRPLSYFEDVTEALSAVRDKLQDVLREEWTNVSPT
EVEVLLSAAEPTTRAGFLQYSQEITLDPNTAHTRLLLSEGSRKATLVKQQQSYSRHPDRF
TGAYRQVLSRESLTGRCYWEVERRGGRVLVAVAYKNISRAGNESLFGHNDKSWSLYCHQN
SYSFYYNRITTHVSGPPSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAGVC
LWDNGATAEFSKLK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggcgcagaaaggagttcagctggagcgggaaatcttatcttgttccatctgtctggat
ctactgaaggatcccgtgagcactacctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggacggagaggatgagaagaagctccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgtcttatgtgtctt
atatcttactgtgaccaacacctccagcctcattatgaatcacctgcctttgagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcaccacgaggtg
atgaagctgttctgccgcactgatcagcagtgtatctgttatatctgcactgtggacgaa
cacaaaggccacgacacggtgtcagcggcagcagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagaagagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgctcagctacccctcactgtcagccctcagtgaacctacacac
tcctccagcatcaacatccgtcctctgagctactttgaggacgtgacggaggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggaggttttactgtcagcagcagagcccaccaccagagctgggttcttacaatat
tcacaggagatcactctggatccaaacacagcacacacacggctgttattatctgagggg
agcagaaaagcaacactcgtgaaacaacaacagtcttattctcgtcacccagacagattc
actggagcttatcgtcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagcggagagggggaagagttcttgtagcagtcgcatacaagaatatcagcagagca
gggaatgaaagtttatttggacacaatgacaaatcttggtccttatattgtcaccaaaac
agttattcattttattacaacagaatcaccactcacgtctcaggtcctccgtcctccaga
gtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtgcagaccacattcactcagccgctacatgctggagtttgt
ctttgggataatggagccacagctgagtttagtaaactgaaatag

DBGET integrated database retrieval system