Trematomus bernacchii (emerald rockcod): 117471008
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Entry
117471008 CDS
T09643
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117471008
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117471008
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
Gp58
Nop16
U-box
MRP-S31
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
117471008
NCBI-ProteinID:
XP_033971678
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MAQKGVQLEREMLISCSICLDLLKDPVTTTCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQ
SFTPRPVLLKNTMLAALVEELKKTGPPPSPADLCYAGAEDVACDVCTGRKLRACKSCLVC
LVSYCDQHLQSHYDVAHLKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQCICYICTVD
EHKGHDTVSAAAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDT
EKMFTELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHT
EDHNQFLHSYPSLSALSEATHSSSINIRPLSYFEDVTAALSAVRDK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggagcgggaaatgttaatatcttgttccatctgtctg
gatctactgaaggatccggtgactactacctgtggacacagctactgcatgaagtgtatt
aaaggcttctgggacggagaggatgagaagaagatccacagctgccctcagtgtaggcag
agcttcacaccgaggcctgtcctgctgaagaacaccatgttagcagctttagtggaggag
ctgaagaagactggacccccaccttctcctgctgatctctgctatgctggagctgaagat
gtggcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgcctcgtgtgt
cttgtatcttactgtgaccaacacctccagtctcattatgacgtagctcacttaaagaaa
cacaagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgag
gtgatgaagctgttctgccgcactgatcagcagtgtatctgttatatctgcactgtggac
gaacacaaaggccacgacacggtgtcagctgcagcagagaggactgagaggcagagagag
ctggaggggagtcgactaaacatccagcagagaatccaggacagagagaaggaggtgaag
ctgcttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacact
gagaagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcag
caggtcagatcccagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctg
gagcaggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacaca
gaggatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaagctaca
cactcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctg
tcagcagtcagagacaaa
DBGET
integrated database retrieval system
