Trematomus bernacchii (emerald rockcod): 117472794
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Entry
117472794 CDS
T09643
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117472794
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117472794
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
zf-RING_10
CENP-F_N
U-box
Prok-RING_4
TMEM106_N
Gp58
Motif
Other DBs
NCBI-GeneID:
117472794
NCBI-ProteinID:
XP_033974089
EnsemblRapid:
ENSTBNG00005009521
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQKGGQLDRETFSCSICLGLLKDPVTTPCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTKLAALVEELKKTGPPPAPADLCYAGAEYVACDVCTGRKRRACKSCLVCL
ASYCDQHLQPHYDAATFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKRLQQEVEAVNGSADKAVEHSE
KMLTELIRLMKKRSSDVKQQVRSQQKREVSRVRELQEKLEQEISELKRKDAELKLLSHTE
DHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREGWTNFSPT
EVEVFLSAAEPTTRAGFLTYSQEITLDPNTAYTQLLLSEGSRKATFMIQPQSYSSHPDRF
TKCPQVLSRESLTGRCYWEVERRGGAVCVAVAYKNIIRAGGGSLFGYNDKCWSLECDQNS
YSFRYNSISTPVSGPLSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAGVRL
CCDDGNTAELCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggaggtcagctggaccgggaaaccttctcttgttccatctgtctgggt
ctactgaaggatccggtgaccactccctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggacggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccaagttagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaatatgtg
gcctgtgatgtctgcactgggaggaaacggagagcctgtaagtcctgcctcgtgtgtctg
gcctcttactgtgaccaacacctccagcctcactatgacgcagctacatttaaaaaacac
aagctagtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacggtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaagcgg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggagcacagtgag
aagatgttgactgagctgatccgtctcatgaagaagagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagagaagtgagtcgagtcagagagcttcaggagaagctggag
caggagatctctgagctgaagaggaaagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctacacac
tcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagagggatggacaaacttctcaccgact
gaagtggaggtttttctgtcagcagcagagcccaccaccagagctgggttcttaacatat
tcacaggagatcactctggatccaaacacagcatacacacagctgttattatctgagggg
agcagaaaagcaacattcatgatacaaccacagtcttattctagtcacccagacagattc
actaagtgtcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagcggagagggggagcagtttgtgtagcagtcgcatacaagaatatcatcagagcaggg
gggggaagtttatttggatacaatgacaaatgttggtccttagagtgtgaccaaaacagt
tattcatttcgttacaacagtatcagcactcccgtctcaggtcctctgtcctccagagta
ggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaaaccatg
actctcctccacagagtccagaccacattcactcagccgctacatgctggagtccgtctt
tgttgtgatgatggaaacactgctgagctttgtaaactgaaatag
DBGET
integrated database retrieval system
