Trematomus bernacchii (emerald rockcod): 117473868
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Entry
117473868 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117473868
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117473868
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
U-box
Nop16
MRP-S31
RSS_P20
Gp58
Motif
Other DBs
NCBI-GeneID:
117473868
NCBI-ProteinID:
XP_033975694
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQKGVQLERETLSCSICLDLLKDPVTTTCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLQCV
ASYCDQHLQPHYDAAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICLICTMDD
HKGHDTVSAAGERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDSE
KTFTELIRLMEKRSSDVKQQLRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLHSYPSLPALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPT
EVEVLLSAAEPTTRAGFLQYSQEITLDPNTAHTRLLLSEGSRKATFMKQSQSYSSHPDRF
TCYAQVLSRESLTGRCYWEVERRGGEVSVAVAYKNISRAGEGLFGFNDKSWSLDCNQNRY
SFRYNSINTPVSDPQSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAGVRPY
NYGDTAELCKLK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggagcgggaaaccttatcttgttcgatctgtctggat
ctactgaaggatccggtgacgactacctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggacggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaagaacaccatgttagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcatgtaagtcctgtctgcagtgtgtg
gcctcttactgtgaccaacacctccagcctcattatgacgcagctccattaaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgtttaatctgcactatggatgac
cataagggccacgacacggtgtcagctgcaggagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagacgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
ctcagatcccagcagaagagagaagtgagtcgggtcaaagagcttcaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgccagccctcagtgaacctacacac
tcctccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaggtggaggttttactgtcagcagcagagcccaccaccagagctgggttcttacaatat
tcacaggagatcactctggatccaaacacagcacacacacggctgttattatctgagggg
agcagaaaagcaacattcatgaaacaatcacagtcttattctagtcacccagacagattc
acttgttatgctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagcggagagggggagaagttagtgtagcagtcgcatacaagaatatcagcagagcaggg
gaaggtttatttggattcaatgacaaatcttggtccttagattgtaaccaaaacagatat
tcatttcgttacaacagtatcaacactcccgtctcagatcctcagtcctccagagtagga
gtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaaaccatgact
ctcctccacagagtgcagaccacattcactcagccgctacatgctggagttcggccttat
aattatggagacactgctgagttgtgtaaactcaaatag
DBGET
integrated database retrieval system