KEGG   Trematomus bernacchii (emerald rockcod): 117473868
Entry
117473868         CDS       T09643                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117473868
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117473868
Motif
Pfam: PRY zf-C3HC4_4 zf-RING_UBOX SPRY zf-B_box zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-RING_10 zf-RING_6 U-box Nop16 MRP-S31 RSS_P20 Gp58
Other DBs
NCBI-GeneID: 117473868
NCBI-ProteinID: XP_033975694
LinkDB
Position
Unknown
AA seq 552 aa
MAQKGVQLERETLSCSICLDLLKDPVTTTCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLQCV
ASYCDQHLQPHYDAAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICLICTMDD
HKGHDTVSAAGERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDSE
KTFTELIRLMEKRSSDVKQQLRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLHSYPSLPALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPT
EVEVLLSAAEPTTRAGFLQYSQEITLDPNTAHTRLLLSEGSRKATFMKQSQSYSSHPDRF
TCYAQVLSRESLTGRCYWEVERRGGEVSVAVAYKNISRAGEGLFGFNDKSWSLDCNQNRY
SFRYNSINTPVSDPQSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAGVRPY
NYGDTAELCKLK
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggcgcagaaaggagttcagctggagcgggaaaccttatcttgttcgatctgtctggat
ctactgaaggatccggtgacgactacctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggacggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaagaacaccatgttagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcatgtaagtcctgtctgcagtgtgtg
gcctcttactgtgaccaacacctccagcctcattatgacgcagctccattaaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgtttaatctgcactatggatgac
cataagggccacgacacggtgtcagctgcaggagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagacgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
ctcagatcccagcagaagagagaagtgagtcgggtcaaagagcttcaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgccagccctcagtgaacctacacac
tcctccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaggtggaggttttactgtcagcagcagagcccaccaccagagctgggttcttacaatat
tcacaggagatcactctggatccaaacacagcacacacacggctgttattatctgagggg
agcagaaaagcaacattcatgaaacaatcacagtcttattctagtcacccagacagattc
acttgttatgctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagcggagagggggagaagttagtgtagcagtcgcatacaagaatatcagcagagcaggg
gaaggtttatttggattcaatgacaaatcttggtccttagattgtaaccaaaacagatat
tcatttcgttacaacagtatcaacactcccgtctcagatcctcagtcctccagagtagga
gtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaaaccatgact
ctcctccacagagtgcagaccacattcactcagccgctacatgctggagttcggccttat
aattatggagacactgctgagttgtgtaaactcaaatag

DBGET integrated database retrieval system