Trematomus bernacchii (emerald rockcod): 117474017
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Entry
117474017 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117474017
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117474017
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
U-box
PaRep2a
UvrD-helicase
Gp58
RSS_P20
Motif
Other DBs
NCBI-GeneID:
117474017
NCBI-ProteinID:
XP_033975900
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAQKGVQLERETLISCPICLDLLKDPVTTSCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQ
SFTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTERKLRASKSCLQC
VASYCDKHLQPHYDAAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVD
EHKDHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKQLQQEVEAVNGSADKAVEDS
EKMFTELIRLMEKRSSDVKQQLRSQQKSEVSRVKELQEKLEQEISELKRRDAELKLLSHT
EDHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLRDEWTNVSP
TEVEVLLSAAEPTTRAGFLQYSQEITLDPNTANTHLLLSEGSRKATLMEQPQSYSSHTDK
FTTRSQVLSRESLTGRCYWEVEWRGTGISVAVAYKNISKAGDESRFGYNDKSWSLFCNQN
SYSFHYNSISTPVSGPQSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAGVR
PYYNYGDTAEFCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggagcgggaaaccttaatatcttgtcccatctgtctg
gatctactgaaggatccggtgactacttcctgtggacacagctactgcatgaagtgtatt
aaaggcttctgggacggagaggatgagaagaagatccacagctgccctcagtgtaggcag
agcttcacaccgaggcctgtcctgctgaagaacaccatgttagcagctttagtggaggag
ctgaagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagat
gtggcctgtgatgtctgcactgagaggaaactgagagccagtaagtcctgtctgcagtgt
gtggcctcttactgtgacaaacacctccagcctcattatgacgcagctccattaaaaaaa
cacaagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgag
gtgatgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggac
gaacacaaagaccacgacacggtgtcagctgcagcagagaggactgagaggcagagagag
ctggaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaag
cagcttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagt
gagaagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcag
cagctcagatcccagcagaagagtgaagtgagtcgagtcaaagagcttcaggagaagctg
gagcaggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacaca
gaggatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctaca
cactcctccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctg
tcagcagtcagagacaaactacaggacgtcctgagagacgaatggacaaacgtctcaccg
actgaggtggaggttttactgtcagcagcagagcccaccaccagagctgggttcttacaa
tattcacaggagatcactctggatccaaacacagcaaacacacatctgttattatctgag
gggagcagaaaagcaacactcatggaacaaccacagtcttattctagtcacacagacaaa
ttcactacacgttctcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagtggagagggacaggaattagtgtagcagtcgcatacaagaatatcagcaaagca
ggggatgaaagtcgatttggatacaatgacaaatcttggtccttattttgtaaccaaaac
agttattcatttcattacaacagtatcagcactcccgtctcaggtcctcagtcctccaga
gtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtgcagaccacattcactcagccgctacatgctggagttcgg
ccttattataattatggagacactgctgagttttgtaaactcaaatag
DBGET
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