Trematomus bernacchii (emerald rockcod): 117478040
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Entry
117478040 CDS
T09643
Name
(RefSeq) H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
tben04145
Phagosome
tben04218
Cellular senescence
tben04514
Cell adhesion molecules
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117478040
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117478040
04145 Phagosome
117478040
09143 Cell growth and death
04218 Cellular senescence
117478040
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117478040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117478040
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
117478040
Exosome [BR:
tben04147
]
Exosomal proteins
Proteins found in most exosomes
117478040
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
Antigens
117478040
BRITE hierarchy
Motif
Pfam:
MHC_I
C1-set
Ig_3
SKG6
Syndecan
DUF3377
Mid2
Motif
Other DBs
NCBI-GeneID:
117478040
NCBI-ProteinID:
XP_033980798
EnsemblRapid:
ENSTBNG00005024057
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MIQLTKWIFLFLPFMWLSLQPAGGALHSLTYIYTAFSKPVELPGLHEFTAMGLLDNKMID
YFDSDDQKKVPKQDFMKEQMPVEYWEKGTQSRQSKQQWFKVNIDILMKRMRQNDTDVHIL
QWMHGCQGEMQPDGKLQYRHGTDMYSYDGTDFLSFDDDHSTWVAATDASLPTKRKWDDVQ
VLKEYTKGYLETECMDWLSKFVEFGKKIDATPPKVHVFSKNAKSEKNIILSCMATGFYPK
DILLQIKRNGRILTKEDGVFSTGTRPNGDETYQRTDRVEILRTDMSTYTCEVEHVASGVH
VEKEWDHKLPSDSGSIIGVVVGVVVVLLVLVLLAVLLILFKKGKLGGSHSSDSRSDGSGE
TLKTVSTKGSDQSDRDSGVSPGDTPSPQSSLLGSVGSISDE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgattcaactaacgaagtggatatttttgtttttgccatttatgtggctcagtttacag
ccagctggaggtgcgttacattccctcacctacatctacacagccttctccaaacctgtg
gaactcccgggcctccatgagttcaccgccatggggctgctggacaacaagatgatcgac
tactttgacagcgatgatcaaaagaaagttcccaaacaggactttatgaaggagcagatg
ccggtagaatactgggagaaaggcacgcagtcccgccagagcaagcagcagtggttcaaa
gtcaacatcgacatcctgatgaaacgaatgagacagaatgacaccgacgtccacattctg
cagtggatgcacggctgtcagggcgaaatgcagcctgacggtaagcttcagtaccgccat
gggacggacatgtacagctacgacgggaccgacttcctgtccttcgacgacgaccactcc
acctgggtggccgcaaccgacgcgtcactgccgactaagaggaagtgggatgacgtccag
gttctgaaagaatacaccaaaggctacctggagactgagtgcatggactggttgagcaag
tttgtggagtttggaaaaaaaattgacgccactcctccaaaggtgcacgtgttttcaaag
aatgccaagtcggagaagaacatcatcctgtcgtgcatggccaccggtttctacccgaaa
gacatcttgctgcagatcaaacggaacggccgtattctaaccaaagaggacggagtgttt
tcaacaggcactcgaccaaacggagacgagacctaccagagaaccgaccgagtggagatt
ctgaggactgacatgtccacctacacctgtgaagtggagcatgttgcgtcaggagtgcat
gttgagaaggaatgggatcataaacttcctagcgattcaggatccatcattggcgtagtg
gtaggggtggtggtggtgctcctggtcctggtcctgttggcggtgctcctgattctcttc
aaaaaaggaaagctcgggggaagccacagcagcgacagcaggagtgatggctcaggcgag
acacttaagactgtttctaccaaaggctcagaccaatctgacagggactctggcgtctcc
cctggtgacacccccagcccccaatccagcctactagggtcggtgggaagtatctcggat
gaataa
DBGET
integrated database retrieval system
