Trematomus bernacchii (emerald rockcod): 117478763
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Entry
117478763 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117478763
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117478763
BRITE hierarchy
Motif
Pfam:
SPRY
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_10
zf-RING_2
Prok-RING_4
zf-RING_5
Oberon_cc
Motif
Other DBs
NCBI-GeneID:
117478763
NCBI-ProteinID:
XP_033981558
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MALQIHQLGRDELCCFICKDLMKDPVTIACGYSYCKSCISRRWDGEKQAKIYSCPHCRQT
FEPRPALVISTVLANLVEEEKKKTEPQAGPSYHRDAGPGEVGCSPTRRKRKSLKSNLQPH
DEVPFKKTKLIEASKLHEMSEKQNELAVSRQNIQQRIHYEEKIVEVLLPEVEAINLSADE
AVRECTELVKLIEQRSSDVTQKIKSRQKYEVSRVKDIQEMLQKDISDLRRKDTELEKLSQ
TDDQIKFLQAYRSLSNLRDPEKPFRVKIGPVRYFKGVTAAVSEARGKVLESFDKEWMKIS
EKVPEVYVKLLPDPQTKADISQYTGPKVLLKLDPNTASMQIQLSEDNRKATKVKKQHSYD
PHVDRFMARSQVLCGKGLTNRCYWEVEVSGFGVSVAVAYRDVPRTGQESAFGDNDKSWAL
ELSKTICNFKHNGEKKAIPVSVLQSSRIGVFLDQKAGVLFFYSVSETITLLHRVHTTFKR
PLYAGLGVHCYGASATFRDI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaaatacatcagctcggtcgggacgaactgtgctgttttatctgcaaggat
ctgatgaaggatccggtgactattgcctgtggttacagctactgtaagagctgtattagt
agacgttgggatggagagaagcaggctaaaatatacagctgtcctcattgcagacagacc
tttgaaccaaggcctgccctggtgataagcaccgtgttggcaaatttagtggaggaagag
aagaagaagacagaaccccaggctggtccatcttatcaccgtgatgctggacctggagaa
gtgggatgtagtcctacaaggagaaagaggaaatctctgaagtccaatctgcagcctcac
gatgaagttccatttaagaaaaccaagctaattgaagcttcgaaacttcatgaaatgagt
gagaagcagaatgagcttgcggtgagtcggcaaaatatacagcagagaatccattatgaa
gagaaaattgtggaggtgcttctgccggaggtggaggccataaatctctctgctgatgaa
gcagtgagggaatgtactgaattagtcaaactcattgagcaaagaagctctgatgtgacg
cagaagattaaatcccggcagaaatatgaagtgagtcgggtcaaagacattcaggagatg
ctgcagaaggacatcagtgatctgaggaggaaagacactgagctggagaaactctcacaa
acagatgatcagatcaagtttctacaggcctaccgctcactgtcaaatctcagggaccct
gaaaaaccattcagagtcaaaattggtcctgtacgatacttcaagggtgtgacagcagct
gtgtcagaggccagaggtaaagtactggagagctttgataaggaatggatgaagatctca
gagaaagtgcctgaagtgtatgttaaattgttgccagacccccagaccaaagctgatatt
tcacaatatacaggccccaaagttcttctcaaactggatccaaacacagcgagcatgcag
atacaattatctgaagataacaggaaggcaaccaaagtgaaaaagcaacactcatatgat
ccacacgtagacagattcatggctaggtctcaggttctgtgtggaaaaggtctgactaat
cgttgttactgggaagtggaggtgagtggtttcggagtttcagtagcagtcgcatacaga
gatgttcccagaacaggacaggaaagtgcattcggggacaatgacaagtcttgggcacta
gagcttagtaaaacgatttgtaatttcaaacacaacggtgaaaaaaaggccattcctgtt
tctgtccttcaatcctcaaggattggtgttttcttggatcaaaaggcaggtgttctgttc
ttctacagcgtctctgaaaccatcaccctcctccacagagtccacaccacattcaagcgg
ccgctctatgctggactcggtgttcattgttatggagcttcggctacatttcgtgacatc
tag
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integrated database retrieval system
