Trematomus bernacchii (emerald rockcod): 117478794
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Entry
117478794 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117478794
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117478794
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
Gp58
RSS_P20
Nop16
Motif
Other DBs
NCBI-GeneID:
117478794
NCBI-ProteinID:
XP_033981590
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQKGVQLDRETFSCAICLDLLKDPVTIPCGHSYCMDCIKHHWDGELIHSCPQCRQSFTP
RPVLLKSTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLRACKSCLMCLISY
CEKHLQPHYDVAQLKKHKLVEPSKKLQENICSHHDEVMKLFCRTDQQCICYICSVDEHKG
HDTVLAAAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSEKMF
TELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTEDHN
QFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPTEVD
VLLSAAEPTTRAGFLQYSQEVTLDPNTAETRLVLSEGSRKATCMKQPQPYSSHPDRFTGY
YPQVLSRESLTGRCYWEVERRGGRVFVAVAYKNISRAGNECGFGNNVKSWSLDCNQNRYS
FRYNSISTPVSGPLSSRVGVYLDHRAGVLSFYSIVSETMTLLHRVQTTFTQPLHAGVWFC
EHGATAEFCKLK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgtgcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatggactgtattaaa
caccactgggatggagagttaatccacagctgccctcagtgtaggcagagcttcacaccg
aggcctgtcctgctgaaaagcaccatgttagcagctttagtggaggagctgaagaagact
ggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggaggaaactgagagcctgtaagtcctgtcttatgtgtcttatatcttac
tgtgagaaacacctccagcctcattatgacgtagctcaattaaagaaacacaagctggtg
gagccctccaagaagctccaggagaacatctgctctcatcacgacgaggtgatgaagctg
ttctgccgcactgatcagcagtgtatctgttatatctgctctgtggacgaacacaaaggc
cacgacacagtgttagctgcagcagagaggactgagaggcagagagagctggaggggagt
cgactaaacatccagcagagaatccaggacagagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgagaagatgttc
actgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcaggtcagatcc
cagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
tctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagaggatcacaac
cagtttctgcacagctacccctcactgtcagccctcagtgaacctacacactcatccagc
atcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtcagcagtcaga
gacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgactgaagtggat
gttttactgtcagcagcagagcccaccaccagagctgggttcttacaatattcacaggaa
gtcactctggatccaaacacagcagagacacggctggtattatctgaggggagcagaaaa
gcaacatgcatgaaacaaccacaaccttattctagtcacccagacagattcactggttat
tatcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagcgg
agagggggaagagtttttgtagcagtcgcatacaagaatatcagcagagcagggaatgaa
tgtggatttggaaacaatgtcaaatcttggtccttagattgtaaccaaaacagatattca
tttcgttacaacagtatcagcactcccgtctcaggtcctctgtcctccagagtaggagtg
tacctggatcacagagcaggtgttctgtccttctacagcatcgtctctgaaaccatgact
ctcctccacagagtgcagaccacattcactcagccgctacatgctggagtttggttttgt
gaacatggagccacagctgagttttgtaaactgaaatag
DBGET
integrated database retrieval system
