Trematomus bernacchii (emerald rockcod): 117478795
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Entry
117478795 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117478795
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117478795
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
SPRY
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
Gp58
Nop16
MRP-S31
Motif
Other DBs
NCBI-GeneID:
117478795
NCBI-ProteinID:
XP_033981591
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAQKGVQLDRETFSCAICLDLLKDPVTIPCGHSYCMKCIKGFWDGELIHSCPHCRQSFTP
RHVLLKNTMLAALVEELKKTGLQAAPTDHCYAGAEDVACDVCTGRKLRACKSCLVCLVSY
CEKHLQPHYDVAQLKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQCICSLCSVDEHKG
HDTVSAAAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSEKMF
TELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTEDHN
QFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPTEVD
VLLSAAEPTTRAGFLQYSQEVTLDPNTAHTRLLSSEGSRKATHMKKPQSYPRHPDRFIGC
SQVLSRESLTGRCYWEVERRGGRVFVAVAYKNISRAGNECQFGFNDKSWSLDCFQNSYTF
LYNSISTPVSGPLSSRVGVYLDHRAGVLSFYSIISETMTLLHRVQTTFTQPLHAGVRVYY
HGTTAEFCKLK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgtgcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggatggagagctaatccacagctgccctcattgtaggcagagcttcacaccg
aggcatgtcctgctgaaaaacaccatgttagcagctttagtggaggagctgaagaagact
ggactccaagctgctcctacagatcactgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggaggaaactgagagcctgtaagtcctgtctcgtgtgtcttgtatcttac
tgtgagaaacacctccagcctcattatgacgtagctcaattaaagaaacacaagctggtg
gagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtgatgaagctg
ttctgccgcactgatcagcagtgtatctgttctctctgctctgtggacgaacacaaaggc
cacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctggaggggagt
cgactaaacatccagcagagaatccaggacagagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgagaagatgttc
actgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcaggtcagatcc
cagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
tctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagaggatcacaac
cagtttctgcacagctacccctcactgtcagccctcagtgaacctacacactcatccagc
atcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtcagcagtcaga
gacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgactgaagtggat
gttttactgtcagcagcagagcccaccaccagagctgggttcttacaatattcacaggaa
gtcactctggatccaaacacagcacacacacggctgttatcatctgaggggagcagaaaa
gcaacacacatgaaaaaaccacagtcttatcctcgtcacccagacagattcattggatgt
tctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagcggaga
gggggaagagtttttgtagcagtcgcatacaagaatatcagcagagcagggaatgaatgt
caatttggattcaatgacaaatcttggtccttagattgtttccaaaacagttatacattt
ctttacaacagtatcagcactcccgtctcaggtcctctgtcctccagagtaggagtgtac
ctggatcacagagcaggtgttctgtccttctacagcatcatctctgaaaccatgactctc
ctccacagagtgcagaccacattcactcagccgctacatgctggagttcgggtttattat
catggaaccacagctgagttttgtaaactgaaatag
DBGET
integrated database retrieval system