Trematomus bernacchii (emerald rockcod): 117478879
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Entry
117478879 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117478879
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117478879
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
SPRY
U-box
zf-RING_5
Prok-RING_4
Gp58
Nop16
Motif
Other DBs
NCBI-GeneID:
117478879
NCBI-ProteinID:
XP_033981703
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQKGVQLDRETFSCAICLDLLKDPVTIPCGHSYCMKCIKHHWDGELIHSCPQCRQSFTP
RPVLLKNTMLAALVEELKKTGLQAAPTDHCYAGAEDVACDVCTGRKLRACKSCLVCLVSY
CEKHLQSHYDVAQLKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQCICYICTMDEHKG
HDTVLAAAERTERQRELEGSRLNIQLGIQDREKEVKLLQQEVEAVNGSADKAVEDSEKMF
TELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTEDHN
QFLHSYPSLSALSEPTHSSSTNIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSSTEVD
VLLSAAEPTTRAGFLQYSQEVTLDPNTAYTNMLLSEGSRKATCMKQPQPYSSHPDRFTGG
SQVLSRESLTGRCYWEVEQRGLGVHVAVAYKNIIRAGNECGFGLNNKSWSLFCNQNSYTF
YYNSILTPVSGPLSSRVGVYLDHRAGVLSFYSIVSETMTLLHRVQTTFTQPLHAGVRLCN
HYEDTAEFCKLK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgtgcgatctgtctggat
ctactgaaggatccggtcactattccctgtggacacagctactgcatgaagtgtattaaa
caccactgggatggagagttaatccacagctgccctcagtgtaggcagagcttcacaccg
aggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctgaagaagact
ggactccaagctgctcctactgatcactgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggaggaaactgagagcctgtaagtcctgcctcgtgtgtcttgtatcttac
tgtgagaaacacctccagtctcattatgacgtagctcaattaaagaaacacaagctggtg
gagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtgatgaagctg
ttctgccgcactgatcagcagtgtatctgttatatctgcactatggacgaacacaaaggc
cacgacacagtgttagctgcagcagagaggactgagaggcagagagagctggaggggagt
cgactaaacatccagctgggaatccaggacagagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgagaagatgttc
actgagctgatccgtctcatggagaaaagaagctctgatgtgaagcaacaggtcagatcc
cagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
tctgagctgaagaggagagacgctgagctgaagttgctgtctcacacagaggatcacaac
cagtttctgcacagctacccctcactgtcagccctcagtgaacctacacactcatccagc
accaacatccgtcctctgagctactttgaggacgtgacggcggccctgtcagcagtcaga
gacaaactacaggacgtcctgagagaggaatggacaaacgtctcatcgactgaagtggat
gttttactgtcagcagcagagcccaccaccagagctgggttcttacaatattcacaggaa
gtcactctggatccaaacacagcatacacaaatatgttattatctgaggggagcagaaaa
gcaacatgcatgaaacaaccacaaccttattctagtcacccagacagattcactggaggt
tctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagcagaga
gggttaggagttcatgtagcagtcgcatacaagaatatcatcagagcagggaatgaatgt
ggatttggattaaataacaaatcttggtccttattttgtaaccaaaacagttatacattt
tattacaacagtatcctcactcccgtctcaggtcctctgtcctccagagtaggagtgtac
ctggatcacagagcaggtgttctgtccttctacagcatcgtctctgaaaccatgactctc
ctccacagagtgcagaccacattcactcagccgctacatgctggagttcggctttgtaat
cattatgaagacacagctgagttttgtaaactgaaatag
DBGET
integrated database retrieval system
