Trematomus bernacchii (emerald rockcod): 117478880
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Entry
117478880 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117478880
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117478880
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
zf-RING_6
Gp58
Nop16
Motif
Other DBs
NCBI-GeneID:
117478880
NCBI-ProteinID:
XP_033981704
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMDCIKHHWDGELIHSCPQCRQSFTP
RPVLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLRACKSCLVCLVSY
CEKHLQSHYDVAQLKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQCICYICTMDEHKG
HDTVSAAAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSEKMF
TELIRLMEKRSSDVKQQLRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTEDHN
QFLHSYPSLSALSEPTHSSSINIPEPTTRAGFLQYSQEVTLDPNTAYTHLLLSEGSRKAT
YMGQPQSYSSHPDRFIGCSQVLSRESLTGRCYWEVEWRGLGVLVAVAYKNIIRAGNECRF
GFNDKSWSLDCNQLSYTFHYNSIKTPVSGPLSSRVGVYLDHRAGVLSFYSIVSETMTLLH
RVQTTFTQPLHAGLWLIDHGDTAEFCKLK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatggactgtattaaa
caccactgggatggagagttaatccacagctgccctcagtgtaggcagagcttcacaccg
aggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctgaagaagact
ggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggaggaaactgagagcctgtaagtcctgcctcgtgtgtcttgtatcttac
tgtgagaaacacctccagtctcattatgacgtagctcaattaaagaaacacaagctggtg
gagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtgatgaagctg
ttctgccgcactgatcagcagtgtatctgttatatctgcactatggacgaacacaaaggc
cacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctggaggggagt
cgactaaacatccagcagagaatccaggacagagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgagaagatgttc
actgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcagctcagatcc
cagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
tctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagaggatcacaac
cagtttctgcacagctacccctcactgtcagccctcagtgaacctacacactcatccagc
atcaacatcccagagcccaccaccagagctgggttcttacaatattcacaggaagtcact
ctggatccaaacacagcatacacacatctgttattatctgaggggagcagaaaagcaaca
tacatgggacaaccacagtcttattccagtcacccagacagattcattggatgttctcag
gtcctgagtagagagagtctgactggacgttgttactgggaggtggagtggagagggtta
ggagttcttgtagcagtcgcatacaagaatatcatcagagcagggaatgaatgtcggttt
ggattcaatgacaaatcttggtccttagattgtaaccaactcagttatacatttcattac
aacagtatcaaaactcccgtctcaggtcctctgtcctccagagtaggagtgtacctggat
cacagagcaggtgttctgtccttctacagcatcgtctctgaaaccatgactctcctccac
agagtgcagaccacattcactcagccgctacatgctggactttggcttattgatcatgga
gacacagctgagttttgtaaactgaaatag
DBGET
integrated database retrieval system