KEGG   Trematomus bernacchii (emerald rockcod): 117478880
Entry
117478880         CDS       T09643                                 
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
  KO
K12006  tripartite motif-containing protein 16
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117478880
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117478880
Motif
Pfam: PRY zf-C3HC4_4 zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 SPRY zf-RING_2 U-box zf-RING_5 Prok-RING_4 zf-RING_6 Gp58 Nop16
Other DBs
NCBI-GeneID: 117478880
NCBI-ProteinID: XP_033981704
LinkDB
Position
Unknown
AA seq 509 aa
MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMDCIKHHWDGELIHSCPQCRQSFTP
RPVLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLRACKSCLVCLVSY
CEKHLQSHYDVAQLKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQCICYICTMDEHKG
HDTVSAAAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSEKMF
TELIRLMEKRSSDVKQQLRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTEDHN
QFLHSYPSLSALSEPTHSSSINIPEPTTRAGFLQYSQEVTLDPNTAYTHLLLSEGSRKAT
YMGQPQSYSSHPDRFIGCSQVLSRESLTGRCYWEVEWRGLGVLVAVAYKNIIRAGNECRF
GFNDKSWSLDCNQLSYTFHYNSIKTPVSGPLSSRVGVYLDHRAGVLSFYSIVSETMTLLH
RVQTTFTQPLHAGLWLIDHGDTAEFCKLK
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatggactgtattaaa
caccactgggatggagagttaatccacagctgccctcagtgtaggcagagcttcacaccg
aggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctgaagaagact
ggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggaggaaactgagagcctgtaagtcctgcctcgtgtgtcttgtatcttac
tgtgagaaacacctccagtctcattatgacgtagctcaattaaagaaacacaagctggtg
gagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtgatgaagctg
ttctgccgcactgatcagcagtgtatctgttatatctgcactatggacgaacacaaaggc
cacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctggaggggagt
cgactaaacatccagcagagaatccaggacagagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgagaagatgttc
actgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcagctcagatcc
cagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
tctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagaggatcacaac
cagtttctgcacagctacccctcactgtcagccctcagtgaacctacacactcatccagc
atcaacatcccagagcccaccaccagagctgggttcttacaatattcacaggaagtcact
ctggatccaaacacagcatacacacatctgttattatctgaggggagcagaaaagcaaca
tacatgggacaaccacagtcttattccagtcacccagacagattcattggatgttctcag
gtcctgagtagagagagtctgactggacgttgttactgggaggtggagtggagagggtta
ggagttcttgtagcagtcgcatacaagaatatcatcagagcagggaatgaatgtcggttt
ggattcaatgacaaatcttggtccttagattgtaaccaactcagttatacatttcattac
aacagtatcaaaactcccgtctcaggtcctctgtcctccagagtaggagtgtacctggat
cacagagcaggtgttctgtccttctacagcatcgtctctgaaaccatgactctcctccac
agagtgcagaccacattcactcagccgctacatgctggactttggcttattgatcatgga
gacacagctgagttttgtaaactgaaatag

DBGET integrated database retrieval system