Trematomus bernacchii (emerald rockcod): 117479086
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Entry
117479086 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117479086
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117479086
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-Nse
U-box
Nop16
RSS_P20
Gp58
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
117479086
NCBI-ProteinID:
XP_033981991
EnsemblRapid:
ENSTBNG00005018364
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQKGVQLDREMLSCPICLDLLKDPVTTSCGHSYCMKCIKGFWDGEDEKKLHSCPQCRQR
FTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLVCL
ASYCDKHLQRHYDVAPLKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQCICSLCSVDE
HKGHDTVSAAAERTERQRELEGSRLNILQRIQDREKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLHSYPSLPALSEPTHSSSINIRPLSYFEDVTEALSAVRDKLQDVLREEWTNVSPT
EVDVLLSAAEPTTRAGFLQYSQEVTLDPNTAYTYLVLSEGSRKATVMEQQQSYSSHPDRF
TEYVQVLSRESLTGRCYWEVEWRGGAVRVAVAYKNIIRAAGQSGLGNNDKSWALYCNQNS
FAFCHNRISTPVSGPLSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAGLQL
DCDDGDTAEFCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaatgttatcttgtcccatctgtctggat
ctactgaaggatccggtgaccacttcctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggacggagaggatgagaagaagctccacagctgccctcagtgtaggcagcgc
ttcacaccgaggcctgtcctgctgaagaacaccatgttagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgcctcgtgtgtctg
gcctcttattgtgacaaacacctccagcgtcattatgacgtagctccattaaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagctgttctgccgcactgatcagcagtgtatctgttctctctgctctgtggacgaa
cacaaaggccacgacacggtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatcctgcagagaatccaggaccgagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagggaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgccagccctcagtgaacctacacac
tcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggaggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcacccact
gaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttacaatat
tcacaggaagtcactctggatccaaacacagcatacacatatctggtattatctgagggg
agcagaaaagcaacagtcatggaacaacaacagtcttattctagtcacccggacagattc
actgagtatgttcaggtcctgagtagagagagtctgactggacgctgttactgggaggtg
gagtggagagggggagcagttcgtgtagcagtcgcatacaagaatatcatcagagcagcg
gggcaaagtggattgggaaacaatgacaaatcttgggcgttatattgtaaccaaaacagt
tttgcattttgtcacaacagaatcagcactcccgtctcaggtcctctgtcctccagagta
ggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaaaccatg
actctcctccacagagtgcagaccacattcactcagccactacatgctggacttcagctt
gattgtgatgatggagacactgctgagttttgtaaactcaaatag
DBGET
integrated database retrieval system
