Trematomus bernacchii (emerald rockcod): 117479975
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Entry
117479975 CDS
T09643
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117479975
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117479975
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
117479975
NCBI-ProteinID:
XP_033982974
EnsemblRapid:
ENSTBNG00005014412
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MLMSTDVASIMLPVSRGVMERDIDTAAGTLANTTGGPGASVRGMKRGDPEPDAQTAAALT
DLPGAECKRPRIDGTTVVDIGQNDEPLNPGYHGYPPHSQGAQDSTGGQEGLVAPPFAAFP
PPPPPQNGLPGAEFVPAAMFAAGVQSPAEVGAGAIVGSPSASPNNNNGKTEEVSQGEAGV
QCGSGDSGGSVGDPSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNERGS
KGFGFVTFETGVDAERAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPFPNGEAALSAL
PYGNAGWKLSPMMGAMYAPEIYAVPGFPYSSAAAAATTAAAAFRGAHLRGRGRPVYSAVR
AAVPQPAMPTYPGVVYQDGFYGAADLYGGYPAAAAAAAAYRYAQPAAVTGATAAAAAYSD
SYGRVYTTDPYHGLNPAAAAYGVGAMDIALTLQASLYRAGYSRFAPY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcttctataatgctgcccgttagtcggggggtaatggag
agagacattgatacagcagccgggaccctcgctaacacgaccgggggtccgggagcttct
gtccgggggatgaagcgaggagaccctgagcccgacgcccagacagcggctgccctgacg
gacctacccggtgcggagtgcaaaagacccaggatagacggcaccactgtggtcgacatt
gggcagaacgacgagccgctaaaccccggttaccatggatacccacctcacagtcagggc
gctcaggattcgacaggaggacaggagggattggtggcccctcctttcgcagcgttcccc
cctcccccccctcctcagaacgggctgccaggcgcagagtttgtccccgcggccatgttc
gctgccggggtccaaagcccagcagaggtgggggccggggccatcgtaggcagcccctct
gcctcccccaacaacaacaacggtaagacggaggaggtgtctcagggtgaggcgggggtg
cagtgtggatcaggagattcaggcggatctgtgggagacccctcggaggccaaagggacc
cccaaacgcctccacgtctcaaacatccctttccgcttccgggaccccgacctcaggcag
atgtttgggcaatacgggaagattctggatgtagagattattttcaatgagaggggctca
aagggtttcggcttcgtgacgtttgagaccggcgtggacgcagagagagcccgggaaaag
ctccacggcacgttggtggaaggtcgtaagattgaggtgaacaatgccacagcccgggtg
atgaccaacaagaaaatggtcagcccgtttcctaacggagaggcggccctgagcgcgctg
ccctacggcaacgcggggtggaaattgagtcctatgatgggagccatgtacgcacctgag
atctacgcagtcccagggttcccctactcttcagcagcggcagcagccaccacagcagca
gcagcgtttcgcggggctcacctgagaggccgcggccgacctgtctacagcgctgtgcga
gccgccgtgcctcaacccgccatgcctacataccctggtgtggtgtatcaggatgggttt
tacggcgctgcagacttatatggaggttatcctgctgctgctgccgcggccgccgcctac
cgctacgcccagccggccgccgtaaccggggcaaccgctgcagccgccgcctacagtgac
agttacggtcgagtgtacactacagacccgtaccacggtttaaatccagccgccgctgct
tatggagtcggagcaatggacattgcactcacattgcaagccagtttataccgggcagga
tacagtaggtttgctccgtactaa
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