Trematomus bernacchii (emerald rockcod): 117480433
Help
Entry
117480433 CDS
T09643
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117480433 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117480433 (abcb4)
04147 Exosome [BR:
tben04147
]
117480433 (abcb4)
04090 CD molecules [BR:
tben04090
]
117480433 (abcb4)
Enzymes [BR:
tben01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117480433 (abcb4)
Transporters [BR:
tben02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117480433 (abcb4)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117480433 (abcb4)
CD molecules [BR:
tben04090
]
Proteins
117480433 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_16
AAA_22
RsgA_GTPase
Rad17
AAA_30
AAA_28
AAA_5
AAA_29
G-alpha
AAA_18
AAA_15
AAA_7
PRK
AAA_14
DUF815
AAA_24
NTPase_1
Motif
Other DBs
NCBI-GeneID:
117480433
NCBI-ProteinID:
XP_033983647
EnsemblRapid:
ENSTBNG00005001424
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MDKKDDAEMMDAPKHQQNGDLSKSKKKGKKKEKEPKLPMVGAIGVFRFASGVDILLILTG
TLCAMVHGVILPLMCIVFGDMTDSFINDSAMSQYNSSIPNATAPRNSTLQAEMKSFAISY
SILGFVVLLVAYGQVAFWTLAAGRQATRIRKLFFHHIMQQDIGWYDVTETGELNTRLTDD
VYKIQEGIGDKAGRLLQAFTTFVTAFVIGFIKGWKLTLVILAVSPALAIAAGIFSKVLAT
FTTKEQTAYAKAGAVAEEVLSAIRTVFAFNGQDREIKRYNKNLEDAKNMGIKKATSANFS
MGLTFLLIYLSYALAFWYGSTLVLSKEYTIGSVLTVFFTVLIGAFAVGQTSPNIQTFASA
RGAAYKVYSIIDHKPAIDSYSEAGFKPDSIKGNIEFKNIRFSYPSRPDIQVLNDLSLSVK
SGQTIALVGSSGCGKSTMIQLLQRFYDPQEGSVTIDGHDIRSLNIRYLREMIGVVSQEPV
LFATTIVENIRYGRLDVTKQEIEQAAKEANAYDFIMSLPDTFETMVGDRGTQMSGGQKQR
IAIARALVRNPKILLLDEATSALDAESETIVQSALDKVRLGRTTIVVAHRLSTIRNADVI
AGFQKGEVVELGSHSKLMEEKGVYHKLVTMQTFQKEEEMDEAECEPSAEEKSPLVHTNSR
SSLKNRKTTRGSSFAVSEADKEEKEKLDEEKLEEDENIPPVSFFKIMRLNIPEWPYILVG
TICAIINGVMQPLFAIIFSNIITVFAHPDPAVIRTRASYFSLMFVLIGAVSFVAMFFQGF
CFGKSGEILTLKLRLGAFKAMMRQDLGWFDNPKNSVGALTTRLATDAAQVQGATGVRMAT
LAQNLANMGTSIIISFVYGWELTLLVLSVVPFMAVAGAVEMKALTGHATEDKKELEKSGK
IATEAIDNIRTVVSLNREPKFESLYQENLEIPFRNSQRNAHVHGLTFSFSQAMIYFAYAG
CFRFGAWLVEENRMDIQGVFLVVSAILYGAMALGEANSFAPNYAKAKISAAHLMALMGRE
PAIDNLSQAGESPDTFDGNVQFDSVMFNYPSRPDVQILQGLNLKVRKGETLALVGSSGCG
KSTTIQLLERFYDPREGRVLLDNKNAQELNIHWLRSQIGIVSQEPVLFDCTIAENIAYGD
NSRIASQAEIEEAAKAANIHSFIDSLPQKYNTQAGDKGTQLSGGQKQRVAIARAILRNPK
VLLLDEATSALDTESEKVVQEALDEASKGRTCIIVAHRLSTIQNADRIAVFKGGVVVEEG
THQQLLAKKGFYFMLVTTQMGHGRK
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaggacgacgcggaaatgatggacgcacccaaacaccaacaaaatggggat
ttaagtaaaagcaagaagaaaggaaagaagaaagagaaagaaccaaaattgcccatggtt
ggcgccattggtgtgtttaggtttgcaagcggcgtggacattctgttgatcctgactggg
acgctctgtgctatggttcacggtgtcattcttcctctcatgtgtattgtgttcggggac
atgacagacagctttataaatgactctgcgatgagccaatacaacagcagcatccccaat
gccacagcaccaagaaacagcaccttacaagcagaaatgaagagctttgccatcagctac
tccatcctgggattcgtcgtgctgctggttgcctacgggcaggtggccttctggacgctg
gccgctggacggcaggccacacgcatccgcaagctgtttttccaccacatcatgcagcag
gacatcggctggtacgatgtcactgaaacaggagagctcaacacgcgtctcacagatgat
gtctataagatccaagaaggaattggcgacaaagctgggaggcttctccaggcctttacc
accttcgtcacagcgtttgtcatcggcttcatcaaaggctggaagctcaccctcgtcatc
ctggctgttagccctgcgctggccattgcagctggaatcttctccaaggtgctggcgact
ttcactactaaagagcagactgcatatgccaaagctggagctgtggcagaagaggtgctc
tctgctatcaggacagtgtttgccttcaatggtcaggacagagaaatcaagagatacaat
aagaacttggaggatgcaaagaatatgggaataaagaaggcgacatctgctaacttttcc
atgggcctcaccttcctgttgatctacctgtcctacgctctggccttctggtacggaagt
acgctcgtcctgagtaaagagtacaccattggatccgtactcaccgtgttcttcaccgtg
ctgattggagcgttcgctgtgggacagacctctcccaacatccagactttcgccagcgcc
cggggagctgcatataaagtgtacagcattattgatcataaaccggccatcgacagttat
tcagaggccggcttcaagcctgactccatcaaaggaaacattgagttcaagaacatccgc
ttcagctacccctcaagaccagacatccaagttttaaacgacttgtctctgagtgtgaag
agtggacagaccattgccttggtagggagcagcggctgtgggaagagcacaatgatccag
ctgctgcagaggttctacgatcctcaggaaggatctgtgactattgacgggcacgacatc
cgttctcttaacatccgctacttgagagagatgatcggcgtggtgagtcaggagcctgtt
ctcttcgccaccaccatcgtggagaacatcagatacggccgacttgacgtgaccaaacag
gagatcgaacaagctgccaaggaggccaatgcatacgacttcattatgagccttcctgac
acgtttgagacgatggtcggagaccgaggaactcaaatgagtggcggacagaagcagagg
atcgcaattgctcgagctctagtccgcaaccccaaaatccttctgttggacgaagccaca
tctgcgcttgatgctgagagtgagaccattgtgcaatctgcactcgacaaggtccgactc
ggtcgtaccaccatcgttgttgcccaccgcctgtcaaccatcagaaacgctgacgtcatc
gctggcttccagaaaggtgaagttgtagagttggggagtcacagcaaactgatggaagaa
aagggagtctaccacaaactggtcaccatgcagactttccagaaagaggaggagatggat
gaggcagagtgtgagccgtctgctgaggagaagagcccgttagtccataccaactctcgc
tcctctctgaaaaataggaagaccacaagaggctcctccttcgctgtctcagaggcagac
aaagaggagaaagaaaagttagatgaggagaaattggaggaggatgaaaatattccccct
gtgtcgttcttcaaaataatgcgtctcaacattcctgagtggccttacattttggtgggg
acgatctgtgccatcatcaacggcgtcatgcagccactgttcgccatcatcttctccaac
atcatcactgtgtttgcacatccagatccagccgtcatcaggacaagagcttcgtacttt
tctctgatgtttgttcttattggagcggtgtcctttgtcgccatgtttttccagggcttc
tgttttgggaaatctggagagatcctgactcttaaactgagactcggggccttcaaagcc
atgatgagacaggaccttggctggtttgacaaccccaaaaacagtgttggagcgctcact
acgagactggccacagacgcagcccaagtgcaaggggctacaggagtgcgtatggccacg
ctggcccagaatctcgccaacatgggcaccagcattatcatctccttcgtgtacggctgg
gagctgacgctgctcgtcctgtcggtggtgcccttcatggcagtggccggcgctgtggag
atgaaggcgctcactggacacgctactgaagacaagaaggagctggagaagtctggaaag
attgctacagaggccattgacaatatccgtactgttgtctcccttaacagagaaccaaag
tttgagtctttgtatcaggaaaacttagaaataccattcaggaactcccagagaaatgcc
cacgtgcacggtctcaccttctccttcagccaggccatgatctactttgcctacgcgggc
tgtttccgctttggagcttggcttgttgaggagaacagaatggatattcagggagtattc
cttgtggtttctgctattctgtacggagccatggctctcggagaggccaactccttcgct
ccaaactacgctaaggccaaaatctcagctgcccacctcatggcactgatgggcagagag
cccgccattgataatctatcccaggcgggagagtcaccggacacatttgatggtaatgtg
caatttgacagtgttatgtttaactacccgtcacgccctgatgtgcaaatcctgcaaggg
ctgaatctgaaggtgaggaagggagagactctggccttggtggggagcagtggctgtgga
aagagcaccaccatccagctgctggagaggttctacgaccccagagaggggagagtgctt
ctggacaataaaaatgcacaagagctgaacatccattggttgagatctcagataggcatc
gtgtcccaggagcccgtgctgtttgactgcacgatagccgaaaacatcgcctatggagac
aacagccgcattgcatcgcaggcggagatagaggaagctgccaaagcggccaacatccac
agcttcatcgatagcctgccacagaagtacaacactcaggccggtgataagggaacgcag
ctgtcaggtggtcagaagcagcgtgtagccatagcccgagctatcctccgcaaccccaaa
gtgctgcttctggacgaggccacctccgcactcgacactgagagtgagaaggtggtgcag
gaggcgttagacgaggccagtaagggcaggacgtgcatcattgtggcccaccgtctgtcc
accatccaaaacgcagaccgcatcgctgtcttcaagggaggagtggtggtggaagagggg
acacatcaacagctgctggccaaaaagggattctacttcatgctggtcaccacacagatg
ggacacgggaggaaataa
DBGET
integrated database retrieval system
