KEGG   Trematomus bernacchii (emerald rockcod): 117481132
Entry
117481132         CDS       T09643                                 
Symbol
rev1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein REV1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117481132 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tben03400]
    117481132 (rev1)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    117481132 (rev1)
SSDB
Motif
Pfam: IMS IMS_C REV1_C BRCT POLH-Rev1_HhH BRCT_2 IMS_HHH UBM LIG3_BRCT HHH_5 PTCB-BRCT DUF1805 Cdd1
Other DBs
NCBI-GeneID: 117481132
NCBI-ProteinID: XP_033984579
LinkDB
Position
Unknown
AA seq 1401 aa
MSRDVWSKKKANASGDNGWAERGGYMAAKVSKLDEQFKLDAPREKQKDGSCSTIFSGVSI
YVNGYTDPSADELRRLMMLHGGQFHVYYSRSKTSHIITNNLPNFKIKELRGEKIVRPLWI
TDSIQAGCLLPCLQYQLYNQKGPLFPAMISRQTPEMAGPSHQKLHLPQRSMQRSVLNQES
QNNSLPPXPNNSRLYPDNIQPQSVQQSSAARLINPQPSHLASTYLNTDPRHRSPSHTHLL
SNPSSTKPPLKPPLSPLQTPQANLQHQRAGQQQPHSNSSYNSSCKEVELKINGFLQTSFD
VMSHSKSKEMQECGKADPLPQVVKEAHLTNGHSHLVNGALKPEDLLSPAKPSDDTELPQR
RVKSSHDKPHSPPGPFQTKPDPYEFPQSPPKQSEQSVVSLKQSSSHEANEKRLKPPPPTY
QEALKATETHLLPKQLHPSRPVNSHPEKTPLSAAHRSLSHSPVRLNGSHHNAFSSASLNS
TNITSKPHHPTEKSPSPSKSSAQLMAQTGGLISEYYSHSRLHQISTWRSGFSEYVNELHS
KRKAAGGASFPGRERLRKSVAQRSDRGGTSAPTSVKSCIFHVDMDCFFVSVGIRHRPELQ
GRPVAVTSSRGQGRVPLRPGAQPQLENQYYQRKHALPEMEDEDLDRSPSEDSPVPHTNGV
DQDIATLSRAEIASCSYEARQVGVKNGMYFGKAKQLCPSLQSVPYDFEAYKEVALTMYET
LAGYTHDIEALSCDELLIDGSALLAELRINPQDLARTIRADIKEKTGCCASVGMGSNILL
ARLATRKAKPDGQHLLKPEEVDDFIRELPVTSLPGVGPVMGRKLAGMGVRSCGDLQQVSL
SQLQKKFGPRTGQTLFRFCRGLDERPVRYEKERKSVSAEMNYNIRFTKVDEAESFLNNLS
MEVQKRLQDAGLRGRRVTLKVMVRKAGAPLEPAKYGGHGICDNLARTVMLAQSTDSGQLI
AAAVIKLFHAMKLQVQEMRGIGIQVQLLDGHHSGPQDSAGPGSRSIKQMFLRQGSGRSRK
IEPADDSSHQENSSLNVGPSSSSTPRPLSSPEPVPGTSRDQHAGRHTPKNSRARLNFSIE
IPSPSQVDRSVLEALPADLREQVEQSWTNRDRTSSHRRPHSPTPPAPPPPPPSVRSRPPS
PPRPAASALYTPPAGTLLLQLPDQPDSPGIVLELPHFSQVDPDVFAALPKELQDELKNAY
NRVTHVQPQATISVEQKNPLLQLKQPGVGVGVGRVKRRYKRKNAGSPVKKGPSPVKRRNT
TNSPAKTLPSPLKPREPINTLKTENGPSTSNLKADIAESKFIPRPAPVLAGAYDMTDIRT
LLREWVTTITEPMEEDILQVVKFCTDLIEDKDLEKLDLIIKYMKRLMQQSLESVWSMAFD
FILDNVQLVVQQTYGSTLKVA
NT seq 4206 nt   +upstreamnt  +downstreamnt
atgagtcgagatgtgtggtcaaaaaagaaagccaatgccagtggtgacaatggttgggct
gagaggggcggctacatggctgccaaagtttctaaactggacgagcagtttaaactggac
gcccccagagagaagcagaaggatgggtcatgctccactattttcagcggagtatctatc
tatgttaatggatacacagacccgagtgcggatgagctgcgcaggctgatgatgctgcac
ggcggtcagttccacgtttactactctcgctccaagacctctcacatcatcaccaacaac
ctgcccaacttcaaaatcaaggagctgagaggggaaaagatcgtccggccgctgtggatc
actgacagtatccaggctgggtgtctcctgccctgcctgcagtaccagctctacaatcag
aagggcccgctcttccctgctatgatttcccgccagacgcctgagatggcagggccgagc
catcagaagctccacctgccgcagcgcagcatgcagcgctctgttctcaaccaggaaagc
cagaataactccctcccccccnncccgaacaacagtcgactttacccagacaacatccaa
cctcagtccgtgcagcagagctctgctgctcgcctcatcaacccacagccaagccactta
gcatccacttacctcaacacagatcccaggcacagaagcccctcacacacccacctgctg
tctaaccccagctccacaaaaccccccctcaagcccccactgtcccctttacaaacacct
caagctaatctgcagcaccagagggccggtcaacaacaacctcacagcaactcttcttac
aacagcagctgcaaggaagtggagttaaagataaatggattcctgcagacctcatttgac
gtgatgagccattcaaaatcaaaagaaatgcaagagtgtggcaaagcagatcctctcccg
caggtggtgaaggaagctcacctgacgaatggacactctcaccttgttaatggtgcctta
aagccagaggacctgctgtcccctgctaaaccctctgatgacacggagctgcctcaacgc
agagtcaagagttcacacgataaacctcacagtcctccagggccgtttcagaccaaaccc
gacccttatgagttcccccagagtcctccaaagcaatccgagcagtctgtggtctctctg
aagcaatccagttcacatgaagccaacgagaagagacttaaacctccaccacccacctac
caggaggctttaaaagccacggaaacccacctactcccaaaacagctccacccatcccgt
ccagttaattcacatccagaaaagactcctctttccgccgcacatcgctctctttcacat
tctcctgtccgtctgaacgggagtcaccacaatgccttttcatctgcctcgctaaactca
accaacataacatccaaacctcatcatcccactgaaaagtctccatcaccgtctaagtcc
tcggcgcagctaatggcccagacaggcggactgatctctgagtattactctcactcacgt
ttacaccagatctccacatggaggtccggcttctcggagtatgtcaatgagctgcacagc
aagaggaaagcagcggggggcgcctctttcccagggagggaacgattgaggaaatcggtt
gcccagcgctcagacagaggaggtacgtcagcacccacaagtgtcaaatcgtgtattttt
cacgtggacatggactgtttcttcgtgtctgtggggatccgacatcgaccagagctccaa
gggaggccagtagctgtgaccagtagccgtggacagggccgggtccccctgaggcccggg
gcccagcctcagctggagaaccagtactaccagaggaaacatgctctccctgagatggaa
gatgaggatctggacagaagtccatcagaagacagtcctgtcccccatactaacggagtg
gaccaggatattgcgactctctctagggcagagattgcatcctgcagttatgaggccagg
caggtgggcgtgaagaacgggatgtattttggaaaagccaaacagctctgtccctcgctg
cagtcggtcccgtatgattttgaggcgtacaaagaggtggctctcaccatgtatgagact
ctggccggttacacccatgacatcgaggctctgagctgtgatgagctgctaatcgacggt
tctgctctgctggccgagctgcgcatcaaccctcaagatctggcccgcaccatcagagcc
gacatcaaggagaaaacgggatgctgtgcttcagtgggcatggggtccaacatccttctg
gctcggctggcaacccgaaaggccaagccggacggacagcacctcctgaagcctgaagag
gtggatgatttcatcagagagctgccagtgaccagcctgccaggtgtggggcctgtaatg
ggcaggaagctggcaggtatgggtgtgcggtcctgtggggatctccagcaggtttctctg
tctcagctgcagaagaagttcggaccccggaccggacagactctgttccgcttctgcagg
ggcctcgacgagcggcccgtccgctacgagaaggagaggaagtctgtctctgctgagatg
aactacaacatccgcttcactaaggttgacgaggctgagtctttcctcaataacttgtcc
atggaggtgcagaaacgtttacaagacgccgggctgcggggccgcagagtgaccctgaag
gtcatggtgcgcaaggctggagcgccactggagccggctaaatacggaggtcacggcata
tgtgacaacctcgccaggactgtgatgctcgctcagtccacagacagcggtcagctgatc
gccgctgcggtcatcaagctgttccacgccatgaagcttcaggtccaggagatgaggggg
atcggcatccaagtccagctcctcgacggacaccactccggcccccaggactccgcgggc
cccgggtctcgctccatcaaacaaatgtttctacgccagggaagtggcagatccagaaaa
atagaacctgcagacgacagctcacatcaggagaattcttccctaaacgtgggcccgtcc
tccagctccactcctcgtcctctgtcctcccccgagccggtccccgggacgagcagagac
cagcacgcaggcagacacactcccaaaaactcccgagcacgtctcaacttcagtattgag
atcccctccccttcacaggtggatcgctctgtgttggaggcgctgcctgcagatctgaga
gagcaggtggagcagtcgtggaccaatcgggacaggacctcgagtcaccgtcgcccccac
agcccgacgccccccgctcctccccccccgcctccctctgtgaggtctcgccccccctcc
ccccctcgtcctgctgcctcagcgctgtacacgccgcccgccggcacgttgctgcttcag
ctcccagaccagcccgacagtccggggattgttctggaactaccacacttctcacaggtt
gatccggacgtatttgccgcccttcccaaagagctgcaggacgaactgaagaatgcctac
aacagagtaacacatgtccagcctcaggcaacaatatcagtggagcagaagaatcctctg
ctgcagctcaaacagccgggagttggagttggagttggtcgggtgaagcggcgctacaag
agaaaaaatgcagggagtcccgttaaaaaaggtccctcgcctgtgaagagacgaaacacg
acaaacagcccagccaaaaccctgccctcccctctaaaaccacgggaaccaataaacaca
ttgaagacggaaaatggtccctccacgtcaaaccttaaagcagacatcgcagagtccaaa
ttcatcccccgccctgctcctgtgctggccggagcctacgacatgacggacattaggacg
ctgctacgggaatgggtcaccaccataacagaacccatggaggaggacatcctgcaggtg
gtgaagttctgcactgatctgatcgaggataaagatctggagaaattggatttgattata
aaatatatgaaaaggctcatgcagcagtcgctggagtcggtttggagcatggctttcgac
tttattctagacaacgtgcagttggttgtgcagcagacgtatggtagcaccctgaaggta
gcatga

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