Trematomus bernacchii (emerald rockcod): 117481993
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Entry
117481993 CDS
T09643
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117481993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117481993
04091 Lectins [BR:
tben04091
]
117481993
CD molecules [BR:
tben04090
]
Proteins
117481993
Lectins [BR:
tben04091
]
I-type lectins (Siglecs)
117481993
BRITE hierarchy
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
Ig_5
C2-set_2
SIT
PPV_E2_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
117481993
NCBI-ProteinID:
XP_033985828
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MRGAAMSLTAAASGLVVFLLSVSVVPGQNDWGVACTSTEICAVKGSTVEINCTYTYPSTW
DDGENTVEKTFWFTKQKGGERVDLTTVSEYAGRVEDLCENNTCTLRIRNLTESDSAEYWF
RIITTRDTYWGPPVTLSVTDLQVEMSRSGSSALLQCLSSCPPGHTSYIWFKNRQEVKEDT
SSYADFSYDSADSYSCALKGYEDFPSPSVYRPKPPSAEIEEGSSVTLTCSNDENPTANYT
WYKEDGSSYLPPLNEKPRLIFSSIQSSDSGQYYCTAENLLGSTRSESIFIDVKYGPKLPS
VSVSPSAEIKEGSSVTLTCSSDANPAANYIWYKENQTVFQGAEGSYHFTSISSEDRGIYY
CKSENQYGGIKSSSLSIDVQYAPKPPSVSVSPSAEIEEGSSVTLTCSSDANPAANYTWYK
KNVSSYLPPPFSDKPRLVLSSIQSSDSGQYYCRAENLVGSRTTDPIFIDVKSNYTWYKED
EYSPKASGQIFTITGFRADHSGKYSCEAQNKIGRRNSTLHQIVVKGSWKLLPLVTIPVVL
LAVISLSVFLWIRKKRASRDSSELEQSPGNREEPLPDQGQPEQQDDLQYASVHFSNNRAE
PLYSNMRAGQHLGHTEQKEATEYAAVNFKSRAPRTRPEDPAELYSVITKIH
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagcagctatgagtttaactgcagcagccagtggattagttgtcttcctgctc
tctgtgtcagtggttccgggtcagaatgactggggagtggcttgcacttctactgagatc
tgtgcagtgaaaggatcaacagtggagataaactgcacctatacatacccgtctacatgg
gatgatggtgaaaacacagttgagaaaacattctggtttactaaacagaaaggtggtgaa
cgtgtagatctgaccacagtctcagagtatgcaggtcgtgtagaggatctctgtgaaaac
aacacctgcactctgagaatcagaaacctgacagagagcgactcagctgagtactggttc
aggatcataacaacccgagatacatactggggtcctccagtcactttgtccgtcacagat
ctccaggtggagatgagcagatcaggatcttctgctctccttcagtgtctcagcagttgt
ccacctggtcatacttcctacatctggtttaagaacagacaggaagtgaaggaagacaca
tcttcttatgcagacttcagttatgattcagcagacagttattcctgtgctttgaaggga
tatgaggacttcccctctccttcagtgtaccgtccaaagcctccctctgctgagatagag
gagggcagttcagtgactctgacctgtagcaatgatgaaaacccaacagctaactacacc
tggtacaaggaggatggatcttcttaccttcctcctctcaatgagaaaccacgtcttatc
ttcagctccatccagtcctctgactctggacagtattactgtacagctgagaatctgctt
gggagtacaagatctgaatccatctttattgatgttaaatatggtccaaagctcccctct
gtgtcagtgagtccctctgctgagataaaggagggcagttcagtgactctgacctgtagc
agtgatgctaacccagcagctaactatatctggtacaaggagaaccaaacagtgtttcag
ggagcagaaggaagttatcatttcacctccatcagctctgaggacagagggatctactac
tgcaagtctgagaatcaatatggagggatcaagtcttcttctctctctatagatgtccag
tatgctccaaagcctccctctgtgtcagtgagtccctctgctgagatagaggagggcagt
tcagtgactctgacctgtagcagtgatgctaacccagcagctaactacacctggtacaag
aagaatgtatcttcttaccttcctcctcctttcagtgataaaccacgtctcgtcctcagc
tccatccagtcctctgactctggacagtattactgcagagctgagaatctggttgggagt
agaacaactgatcccatcttcattgatgtgaaatctaactacacctggtacaaggaggat
gaatactctccaaaagcttcaggacagatcttcaccatcactggcttcagagctgatcac
agtgggaagtattcctgtgaagcccagaacaagataggacgtcgtaactccaccttacat
cagattgttgtgaaaggatcatggaagctactacctttggtaacaatcccagttgttctc
ctggctgtcatttctctctctgtcttcctgtggatcagaaaaaagagggcttccagagac
tcgtctgagctcgagcagagcccaggcaacagggaagagcctctaccggatcagggacag
ccggagcagcaggatgaccttcagtatgccagcgttcacttctccaacaaccgagcagaa
cctctttactccaacatgagagcaggtcaacacctcggacacacggagcaaaaggaagca
acggagtacgctgccgtcaacttcaaaagtcgtgccccgaggaccagaccagaggatcca
gctgaattgtacagcgtgatcaccaaaatccactga
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