Trematomus bernacchii (emerald rockcod): 117483347
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Entry
117483347 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117483347
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117483347
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-Nse
zf-RING_10
U-box
Phasin_2
Motif
Other DBs
NCBI-GeneID:
117483347
NCBI-ProteinID:
XP_033987533
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAQKGVQLDREILSCPICLDLLKDPVTTTCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTIIAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLVCL
ASYCDKHLQPHYQLPVFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEGSE
KMFTELIRLMEKRSSDVKQQLRSQQKSEVSRVRELQEKLEQEMAELKRRDAELKLLSHTE
DHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPT
EVDVLLSAAEPTTRAGFLEYSQEITLDPNTAHTQLVLSEGSRKATRMKQQQSYSSHPDRF
TARPQVLSRESLTGRCYWEVEWRGGEVRVAVTYKNISRAGDECLFGYNDKSWSLECNLNR
YTFRYNSIHTPVSGPLSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHAGVLL
CYVGNTAEFCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggagttcagctggaccgggaaatcttatcttgtccgatctgtctggat
ctactgaaggatccggtgacgactacctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggatggagaggatgagaagaagatccacagctgccctcagtgtcggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatcatagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggagaaagctgagagcctgtaagtcctgcctcgtgtgtctg
gcctcttattgtgacaaacacctccagcctcattatcaattacctgtctttaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacagtgtcggctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggagggcagtgag
aagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
ctcagatcccagcagaagagtgaagtgagtcgagtcagagagcttcaggagaagctggag
caggagatggctgagctgaagaggagagacgctgagctcaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctacacac
tcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggatgttttactatcagcagcagagcccaccaccagagctgggttcttagaatat
tcacaggaaatcacactggatccaaacacagcacacacacagctggtattatctgagggg
agcagaaaagcaacacgcatgaaacaacaacagtcttattctagtcacccagacagattc
actgcacggcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagagggggagaagttcgtgtagcagtcacatacaagaatatcagcagagcaggg
gatgaatgtttatttggatacaatgacaaatcttggtccttagagtgtaacctaaaccgt
tatacatttcgttacaacagtatccacactcccgtctcaggtcctctgtcctccagagta
ggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaaccatg
actctcctccacagagtccagaccacattcactcagccgctacatgctggagttttgctt
tgttatgttggaaacacagctgagttctgtaaactgaaatag
DBGET
integrated database retrieval system
