Trematomus bernacchii (emerald rockcod): 117483496
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Entry
117483496 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117483496
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117483496
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-Nse
zf-RING_10
RSS_P20
U-box
DUF2383
Motif
Other DBs
NCBI-GeneID:
117483496
NCBI-ProteinID:
XP_033987749
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MVQKGVQLDREILSCPICLDLLKDPVTTTCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTIIAALVEELKKTGPPPAPADHCYAGAEDVACDVCTGRKLRACKSCLVCL
ASYCDKHLQPHYESAVFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVEE
HKGHDTVSAAAERTERQRELEGSRQNIQQRIQDREKEVKLLQQEVEAVNGSADKAVKGSV
KTFTELIRLMEERSSDVKQQLRSQQKSEVSRVRELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLHSYPSLPALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPT
EVDVLLSAAEPTTRAGFLEYSQEITLDPNTAYTQLVLSEGSRKATYMEQQQSYSSHPDRF
TARPQVLSRESLTGRCYWEVERRGGVHVAVAYKNISRAGGRIECLFGFNDKSWSLDCDKN
SYSFRYNNIITTVSGPQSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHAGVL
LYYDYGTTAEFCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagaaaggagttcagctggaccgggaaatcttatcttgtcccatctgtctggat
ctactgaaggatccggtgacgactacctgtggacacagctactgcatgaagtgtattaaa
ggtttctgggatggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatcatagcagctttagtggaggagctg
aagaagaccggacccccacctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgagagcctgtaagtcctgcctcgtgtgtctg
gcctcttattgtgacaaacacctccagcctcattatgaatcagctgtctttaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggaggaa
cacaaaggccacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtgaagggcagtgtg
aagacgttcactgagctgatccgtctcatggaggaaagaagctctgatgtgaagcagcag
ctcagatcccagcagaagagtgaagtgagtcgagtcagagagcttcaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctcaagctgctctctcacacagag
gatcacaaccagtttctgcacagctacccctcactgccagccctcagtgaacctacacac
tcctccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttagaatat
tcacaggagatcactctggatccaaacacagcatacacacagctggtattatctgagggg
agcagaaaagcaacatacatggaacaacaacagtcttattctagtcacccagacagattc
actgcacggcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagcggagaggaggagttcatgtagcagtcgcatacaagaatatcagcagagcagggggt
aggattgaatgtttatttggattcaatgacaaatcttggtccttagattgtgacaaaaac
agttattcatttcgttacaacaatatcatcactaccgtctcaggtcctcagtcctccaga
gtaggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccacattcactcagccgctacatgctggagttttg
ctttattatgattatggaaccacagctgagttctgtaaactgaaatag
DBGET
integrated database retrieval system
