Trematomus bernacchii (emerald rockcod): 117483742
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Entry
117483742 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117483742
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117483742
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-RING_2
zf-RING_5
Prok-RING_4
U-box
Nuf2_DHR10-like
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
117483742
NCBI-ProteinID:
XP_033987983
EnsemblRapid:
ENSTBNG00005022217
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MAQKGAQLDQDAICCSICLEVLKDPATTSCGHSFCMNCIQTHWDEEDEEEAYSCPQCRQS
FTPRPVLLKSIMLADLVEGLKKTGLEEAPADLCYAGAEDVACDVCTGRKLRACKSCLQCL
ISYCENHLQPHYESPAFGKHKLVEPSKKLQENICSRHHEAMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRQNIQKRIQVREKMVERLQQEVEAIDCSADKAVEDSE
KMFTELMRLMEKRRSDVKQQVISEQTIEVNRVIDLQEKLEQEIAELKKRDAALELLSHTE
DHTQFIQSYPSSTHSSSILPLRYIEDLKAALSKFRDKLLDVLRDKWTNVYLTVGDVDMLL
SQPQPKTRAEFLKYSRQITLDPNTANTRFLLSERNRKVTSTPGESYPSHPDRFTTCQQVL
SKESLPGRCYWEVEKGVGGIAVAVAYKDNNTVNEQFGESEKSWALGFYKKCYDFKYNTIT
TSVSGPQSSKVGVYLDQSAGILSFCSISEETMTLLHRVQTTFTEPLYAGLRLYSPTGNTA
EML
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagctcagctcgaccaggacgcaatttgctgttcgatatgtctggaa
gtacttaaggatcctgcgactacttcctgtggacacagtttctgcatgaattgtattcaa
acccactgggatgaagaggatgaggaggaagcctacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaagcatcatgttagcagatttagtggaggggctg
aagaagactggacttgaagaagctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgagagcctgtaagtcctgtctgcagtgtttg
atctcttactgtgagaatcacctccagcctcactatgaatctcctgcctttggaaaacac
aagctggtggagccctccaagaagctccaggagaacatatgctctcgtcaccacgaggcg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagaagagaatccaggtcagagagaagatggtggagcgg
cttcagcaggaggtggaggctatagactgctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatgcgtctcatggagaaaagaagatctgatgtgaagcagcag
gtcatatctgagcaaacaattgaagtgaatcgagtgatagatcttcaggagaagctggag
caggagattgctgagctgaagaagagagacgccgcactggagttgctctctcacacagag
gatcacacccagtttattcaaagctacccctcatctacacactcatccagcatccttcct
ctgcgatacattgaagatttgaaagcagctttgtcaaaattcagagataaactgctggac
gtcctgagagataaatggacaaacgtctatctcacagtgggtgatgtggacatgttgctg
tcacaaccacagcccaagaccagagctgaattcttaaaatattcacgtcaaatcacactg
gatccaaacacagcaaacacacgttttttgttatctgagaggaaccgaaaagtaacttca
acgccaggagaaagttatcctagtcacccagacagattcactacatgtcagcaggtcctg
agtaaagagagtctgcctggacgttgttactgggaggtggagaaaggtgtgggaggaatt
gcggtggctgtagcatacaaagataataacactgtaaatgaacaatttggagagagtgaa
aagtcgtgggcattaggtttttacaaaaagtgttatgatttcaaatataacactatcaca
acatctgtctcaggtcctcagtcctccaaagttggagtttacctggatcaaagtgcaggt
attctgtccttctgcagcatctcagaggaaaccatgaccctcctgcacagagtccagacc
accttcactgagcctctctatgcaggacttcgtctttattctcccactggaaacactgct
gagatgttgtga
DBGET
integrated database retrieval system
