Trematomus bernacchii (emerald rockcod): 117483761
Help
Entry
117483761 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117483761
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117483761
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Gp58
Motif
Other DBs
NCBI-GeneID:
117483761
NCBI-ProteinID:
XP_033988002
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVGTSCGHSYCMKCIQTHWDKEDEKKVYSCPQCRKS
FTPRPVLLKNTMLADLVEELKKTELQAAPADHCYAGAEDVACDVCTGRKLRACKSCLQCL
ASYCEKHLQPHYDAAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRQNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRFMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEMAELKRRDAELKLLSHTE
DHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSLT
EVDVLLSAAEPTTRAGFLKYSQEITLDPNTADTQLLLSEGSRKATNMEQQQSYSSHPDRF
TVRHQVLSRESLTGRCYWEVEWRGGGVIVAVAYKNISRGGNETLFGFNDKSWALLYEQNS
YSFYYNSILTPVSGPQSSRVGVYLDHRAGILSFYSVSETTTLLHRVQTTFTQPLHAGVYL
HCHGDTAELCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttcgatctgtctggat
ctcctgaaggatccggtggggacttcctgtggacacagctactgcatgaagtgtattcaa
acccactgggataaagaggatgagaagaaagtctacagctgccctcagtgtagaaagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctg
aagaagactgaactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgtctgcagtgtctg
gcctcttattgtgagaaacacctccagcctcattatgacgcagctccattaaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtttcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatggctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctacacac
tcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcactgact
gaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttaaaatat
tcacaggagatcacactggatccaaacacagcagacacacagctgttattatctgagggg
agcagaaaagcaacaaacatggaacaacaacagtcttattctagtcacccagacagattc
actgtacggcatcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagagggggaggagttattgtagcagtcgcatacaagaatatcagcagaggaggg
aatgaaactttatttggattcaatgacaaatcctgggcgttactttatgagcaaaacagt
tattcattttattacaacagtatcctcactcccgtctcaggtcctcagtcctccagagta
ggagtgtacctggatcacagagcaggtatcctgtccttctacagcgtctctgaaaccacg
actctcctccacagagtccagaccacattcactcagccgctacatgctggagtttatctt
cattgtcatggagacacagctgagttgtgtaaactgaaatag
DBGET
integrated database retrieval system
