Trematomus bernacchii (emerald rockcod): 117486387
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Entry
117486387 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117486387
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117486387
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
zf-RING_6
zf-RING_11
Gp58
Nop16
RSS_P20
Motif
Other DBs
NCBI-GeneID:
117486387
NCBI-ProteinID:
XP_033990700
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAQKGVQLERETFSCSICLDLLKDPVTIPCGHSYCMKCIKGFWDGEDEKEIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLQCV
ASYCDKHLQPHYESPVFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPT
EVEVLLSAAEPTTRAGFLQYSQEITLDPNTAETHLLLSEGSRKATLMKQPQSYSSHPDRF
IGWYQVLSRESLTGRCYWEVEWRGGAVRVAVAYKNISRAGGSRFGYNDKSWSLDCKLNSY
SFCYNSITTPVSGPLSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHAGVRPY
QSYGDTAEFCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggagcgggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggacggagaggatgagaaggagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaagaacaccatgttagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgtctgcagtgtgtg
gcctcttactgtgacaaacacctccagcctcattatgaatcacctgtctttaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacggtgtcagctgctgcagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagaagagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctacacac
tcctccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaggtggaggttttactgtcagcagcagagcccaccaccagagctgggttcttacaatat
tcacaggagatcactctggatccaaacacagcagagacacatctgttattatctgagggg
agcagaaaagcaacactcatgaaacaaccacagtcttattctagtcacccagacagattc
attggatggtatcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagagggggagcagttcgtgtagcagtcgcatacaagaatatcagcagagcaggg
ggaagtcgatttggatacaatgacaaatcttggtccttagattgtaaactaaacagttat
tcattttgttacaacagtatcaccactcccgtctcaggtcctctgtcctccagagtagga
gtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaaccatgact
ctcctccacagagtgcagaccacattcactcagccgctacatgctggagttcggccttat
cagagttatggagacactgctgagttttgtaaactgaaatag
DBGET
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