Trematomus bernacchii (emerald rockcod): 117486405
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Entry
117486405 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117486405
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117486405
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
U-box
Nop16
RSS_P20
Motif
Other DBs
NCBI-GeneID:
117486405
NCBI-ProteinID:
XP_033990724
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQKGVQLERDTLISCPICLDLLKDPVTTSCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQ
SFTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLVC
LASYCDKHLQPHYELPVFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVD
EHKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDS
EKMFTELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHT
EDHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSS
TEVDVLLSAAEPTTRAGFLQYSQEITLDPNTAHTHLVLSEGSRKATRMEQEQSYSSHPDR
CTTPFQVLSRESLTGRCYWEVERRGRGVHVAVAYKNISRGWEGVFGYNDKSWSLDCDQNS
YSFHYNNINTPVSGPPSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHAGVRL
HQSFGATAEFCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggagcgggacaccttaatatcttgtcccatctgtctg
gatctactgaaggatccggtgactacttcctgtggacacagctactgcatgaagtgtatt
aaaggcttctgggacggagaggatgagaagaagatccacagctgccctcagtgtaggcag
agcttcacaccgaggcctgtcctgctgaagaacaccatgttagcagctttagtggaggag
ctgaagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagat
gtggcctgtgatgtctgcactgggaggaaactaagagcctgtaagtcctgtctggtgtgt
ctggcctcttactgtgacaaacacctccagcctcattatgaattgcctgtctttaaaaaa
cacaagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgag
gtgatgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggac
gaacacaaaggccacgacacggtgtcagctgctgcagagaggactgagaggcagagagag
ctggaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaag
ctgcttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagt
gagaagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcag
caggttagatcccagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctg
gagcaggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacaca
gaggatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctaca
cactcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctg
tcagcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcatcg
actgaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttacaa
tattcacaggagatcacactggatccaaacacagcacacacacatctggtattatctgag
gggagcagaaaagcaacacgcatggaacaagaacagtcttattctagtcacccagacaga
tgcactacaccttttcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagcggagagggagaggagttcatgtagcagtcgcatacaagaatatcagcagaggg
tgggaaggtgtatttggatacaatgacaaatcttggtcattagattgtgaccaaaacagt
tattcatttcattacaacaatatcaacactcccgtctcaggtcctccgtcctccagagta
ggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaaccatg
actctcctccacagagtgcagaccacattcactcagccgctacatgctggagttcggctt
catcagagttttggagccactgctgagttttgtaaactgaaatag
DBGET
integrated database retrieval system
