Trematomus bernacchii (emerald rockcod): 117487719
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Entry
117487719 CDS
T09643
Symbol
rela
Name
(RefSeq) transcription factor p65 isoform X1
KO
K04735
transcription factor p65
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04137
Mitophagy - animal
tben04210
Apoptosis
tben04218
Cellular senescence
tben04620
Toll-like receptor signaling pathway
tben04621
NOD-like receptor signaling pathway
tben04622
RIG-I-like receptor signaling pathway
tben04623
Cytosolic DNA-sensing pathway
tben04625
C-type lectin receptor signaling pathway
tben04920
Adipocytokine signaling pathway
tben05132
Salmonella infection
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117487719 (rela)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117487719 (rela)
09143 Cell growth and death
04210 Apoptosis
117487719 (rela)
04218 Cellular senescence
117487719 (rela)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117487719 (rela)
04621 NOD-like receptor signaling pathway
117487719 (rela)
04622 RIG-I-like receptor signaling pathway
117487719 (rela)
04623 Cytosolic DNA-sensing pathway
117487719 (rela)
04625 C-type lectin receptor signaling pathway
117487719 (rela)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117487719 (rela)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117487719 (rela)
09171 Infectious disease: bacterial
05132 Salmonella infection
117487719 (rela)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117487719 (rela)
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117487719 (rela)
BRITE hierarchy
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TPX2
Motif
Other DBs
NCBI-GeneID:
117487719
NCBI-ProteinID:
XP_033992261
EnsemblRapid:
ENSTBNG00005018582
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MDAVYGWGMTPHNQVQTAGPFIEIIEQPKQRGMRFRYKCEGRSAGSIPGEKSNETTKTHP
AIKVHNYSGPLHVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRIHSFQNLGIQC
VKKKDVNEAITCRLQTNNNPFNIPDAKVWEEEFDLNAVRLCFQATITLPTGDLIPLKPVV
SQPIFDNRAPNTAELKICRVNRNNGSCKGGDEIFLLCDKVQKEDIEVRFFQDSWEGKGTF
SQADVHRQVAIVFRTPPYRDANLTEPIRVKMQLRRPSDREVSEPMDFQYLPSDPDEYRLS
EKRKRTGDMFQSLKLGPMLSSVSIPQDRRHISPARRTITTKPPSMNAQVAAVVPSGASGA
KPQSSYSYQPGQLFSVQPKMEPVSAATTNQTWKIMESLRLGSQPKATPVPNFTMSQAPSS
TTTSTANQDYSTVNLADLHEFFPNISSAMAQETAASQAGASSSQSSSSFTLQGSQYRVDP
PLVDDDIPEFPSFSEAQPPGVLDNLNMDDFEDLLNPNLMNEGGNVPVMLASASCQQAHSS
SSAAHAAASQNTSDPAGLPGSTWMNYPNSIVHLLQNEGMIDMSSNNGNHRSTVLDEFDEL
MSADEDRLISIFNSGSQAGFVSGHPT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgtgtatggatggggtatgacaccgcacaaccaagtccaaacagcaggcccc
ttcatagagatcatcgagcagccgaagcagaggggcatgaggttcaggtataagtgtgag
gggcggtcagctggaagcatccccggagagaagagcaacgaaaccaccaagacccaccca
gccatcaaggtgcacaactacagtggccccctgcatgttcgcgtctcattggtgacgaag
aacccaccccacaaacctcacccgcatgaactggtcggaaaagactgcaaacatggctac
tacgaggcagacctgcaggagagaagaatacacagttttcagaacctgggcatacagtgt
gtcaagaagaaggatgtgaatgaagccatcacgtgtcggctgcagaccaacaacaacccc
ttcaacattcccgatgcgaaggtgtgggaggaggaatttgacttgaacgcggtccggctt
tgcttccaggccaccatcactcttcctaccggggatctgattcccctgaagcctgtggta
tcgcagcccatctttgacaacagggcgccaaacacagctgagctgaagatctgccgagtc
aaccgcaacaatggaagctgcaaaggaggggatgaaatatttctactgtgtgacaaagtg
caaaaagaggacatcgaggtgcgcttcttccaggactcctgggagggaaaaggcactttc
tcgcaggctgacgtccacaggcaggtggccattgtgttccgcacaccgccgtaccgcgac
gctaacctcaccgagcccatcagagtcaagatgcagctgcgtcggccctcagaccgcgag
gtcagcgagccaatggacttccagtacctgccctctgacccagatgaatacaggctgagt
gagaagaggaagcgtacaggggacatgttccagagcctgaagctggggcccatgctctct
agtgtgtccattccacaagatagacggcacataagcccggcaaggagaacaatcacaacc
aagcctccatctatgaacgcacaagttgcagctgtggtgccctctggtgccagtggagcc
aaaccccagtcttcctactcatatcaaccgggccagcttttctcagtccagcccaagatg
gagccagtctctgctgcaactacaaaccaaacatggaaaatcatggagagcctgcgcctg
ggctcccaacccaaggccactccagtgcccaacttcacaatgagccaggctccatcctct
accaccacgtccaccgccaaccaggactactcaaccgtcaacctggcagacctgcacgag
ttcttccccaacatctcctcggccatggcccaggagacggcagcttctcaggccggcgcg
tcctcctcacagagcagcagctccttcaccctgcagggctctcagtaccgggtggaccca
ccacttgtggacgatgatatcccagagttcccaagcttttccgaagcccagcctccaggt
gttctggataacctaaacatggacgactttgaggacctcctgaacccgaacctcatgaac
gagggtggaaacgtccccgtgatgttggcttcagcttcatgccaacaagctcacagctcg
tcttccgctgctcacgccgcagcatcccagaacacatctgaccccgccggcctcccagga
agcacctggatgaattaccccaacagcattgtccacctgctccagaacgagggcatgatt
gacatgtcgtccaacaacggcaaccaccgctccaccgtgctcgatgagttcgacgagttg
atgtctgcagacgaggatcgtcttatttccatttttaacagtggaagccaagctgggttt
gtgtcaggacacccgacttaa
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integrated database retrieval system