KEGG   Trematomus bernacchii (emerald rockcod): 117487719
Entry
117487719         CDS       T09643                                 
Symbol
rela
Name
(RefSeq) transcription factor p65 isoform X1
  KO
K04735  transcription factor p65
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04010  MAPK signaling pathway
tben04137  Mitophagy - animal
tben04210  Apoptosis
tben04218  Cellular senescence
tben04620  Toll-like receptor signaling pathway
tben04621  NOD-like receptor signaling pathway
tben04622  RIG-I-like receptor signaling pathway
tben04623  Cytosolic DNA-sensing pathway
tben04625  C-type lectin receptor signaling pathway
tben04920  Adipocytokine signaling pathway
tben05132  Salmonella infection
tben05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117487719 (rela)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    117487719 (rela)
  09143 Cell growth and death
   04210 Apoptosis
    117487719 (rela)
   04218 Cellular senescence
    117487719 (rela)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117487719 (rela)
   04621 NOD-like receptor signaling pathway
    117487719 (rela)
   04622 RIG-I-like receptor signaling pathway
    117487719 (rela)
   04623 Cytosolic DNA-sensing pathway
    117487719 (rela)
   04625 C-type lectin receptor signaling pathway
    117487719 (rela)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    117487719 (rela)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117487719 (rela)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117487719 (rela)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tben03000]
    117487719 (rela)
Transcription factors [BR:tben03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    117487719 (rela)
Motif
Pfam: RHD_DNA_bind RHD_dimer TPX2
Other DBs
NCBI-GeneID: 117487719
NCBI-ProteinID: XP_033992261
EnsemblRapid: ENSTBNG00005018582
LinkDB
Position
Unknown
AA seq 626 aa
MDAVYGWGMTPHNQVQTAGPFIEIIEQPKQRGMRFRYKCEGRSAGSIPGEKSNETTKTHP
AIKVHNYSGPLHVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRIHSFQNLGIQC
VKKKDVNEAITCRLQTNNNPFNIPDAKVWEEEFDLNAVRLCFQATITLPTGDLIPLKPVV
SQPIFDNRAPNTAELKICRVNRNNGSCKGGDEIFLLCDKVQKEDIEVRFFQDSWEGKGTF
SQADVHRQVAIVFRTPPYRDANLTEPIRVKMQLRRPSDREVSEPMDFQYLPSDPDEYRLS
EKRKRTGDMFQSLKLGPMLSSVSIPQDRRHISPARRTITTKPPSMNAQVAAVVPSGASGA
KPQSSYSYQPGQLFSVQPKMEPVSAATTNQTWKIMESLRLGSQPKATPVPNFTMSQAPSS
TTTSTANQDYSTVNLADLHEFFPNISSAMAQETAASQAGASSSQSSSSFTLQGSQYRVDP
PLVDDDIPEFPSFSEAQPPGVLDNLNMDDFEDLLNPNLMNEGGNVPVMLASASCQQAHSS
SSAAHAAASQNTSDPAGLPGSTWMNYPNSIVHLLQNEGMIDMSSNNGNHRSTVLDEFDEL
MSADEDRLISIFNSGSQAGFVSGHPT
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggacgctgtgtatggatggggtatgacaccgcacaaccaagtccaaacagcaggcccc
ttcatagagatcatcgagcagccgaagcagaggggcatgaggttcaggtataagtgtgag
gggcggtcagctggaagcatccccggagagaagagcaacgaaaccaccaagacccaccca
gccatcaaggtgcacaactacagtggccccctgcatgttcgcgtctcattggtgacgaag
aacccaccccacaaacctcacccgcatgaactggtcggaaaagactgcaaacatggctac
tacgaggcagacctgcaggagagaagaatacacagttttcagaacctgggcatacagtgt
gtcaagaagaaggatgtgaatgaagccatcacgtgtcggctgcagaccaacaacaacccc
ttcaacattcccgatgcgaaggtgtgggaggaggaatttgacttgaacgcggtccggctt
tgcttccaggccaccatcactcttcctaccggggatctgattcccctgaagcctgtggta
tcgcagcccatctttgacaacagggcgccaaacacagctgagctgaagatctgccgagtc
aaccgcaacaatggaagctgcaaaggaggggatgaaatatttctactgtgtgacaaagtg
caaaaagaggacatcgaggtgcgcttcttccaggactcctgggagggaaaaggcactttc
tcgcaggctgacgtccacaggcaggtggccattgtgttccgcacaccgccgtaccgcgac
gctaacctcaccgagcccatcagagtcaagatgcagctgcgtcggccctcagaccgcgag
gtcagcgagccaatggacttccagtacctgccctctgacccagatgaatacaggctgagt
gagaagaggaagcgtacaggggacatgttccagagcctgaagctggggcccatgctctct
agtgtgtccattccacaagatagacggcacataagcccggcaaggagaacaatcacaacc
aagcctccatctatgaacgcacaagttgcagctgtggtgccctctggtgccagtggagcc
aaaccccagtcttcctactcatatcaaccgggccagcttttctcagtccagcccaagatg
gagccagtctctgctgcaactacaaaccaaacatggaaaatcatggagagcctgcgcctg
ggctcccaacccaaggccactccagtgcccaacttcacaatgagccaggctccatcctct
accaccacgtccaccgccaaccaggactactcaaccgtcaacctggcagacctgcacgag
ttcttccccaacatctcctcggccatggcccaggagacggcagcttctcaggccggcgcg
tcctcctcacagagcagcagctccttcaccctgcagggctctcagtaccgggtggaccca
ccacttgtggacgatgatatcccagagttcccaagcttttccgaagcccagcctccaggt
gttctggataacctaaacatggacgactttgaggacctcctgaacccgaacctcatgaac
gagggtggaaacgtccccgtgatgttggcttcagcttcatgccaacaagctcacagctcg
tcttccgctgctcacgccgcagcatcccagaacacatctgaccccgccggcctcccagga
agcacctggatgaattaccccaacagcattgtccacctgctccagaacgagggcatgatt
gacatgtcgtccaacaacggcaaccaccgctccaccgtgctcgatgagttcgacgagttg
atgtctgcagacgaggatcgtcttatttccatttttaacagtggaagccaagctgggttt
gtgtcaggacacccgacttaa

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