Trematomus bernacchii (emerald rockcod): 117488678 Help Entry 117488678         CDS       T09643                                  Symbol thoc1 Name (RefSeq) THO complex subunit 1   KO K12878   THO complex subunit 1 Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben03013   Nucleocytoplasmic transport tben03040   Spliceosome Brite KEGG Orthology (KO) [BR:tben00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     117488678 (thoc1)   09122 Translation    03013 Nucleocytoplasmic transport     117488678 (thoc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tben03019]     117488678 (thoc1)    03041 Spliceosome [BR:tben03041]     117488678 (thoc1) Messenger RNA biogenesis [BR:tben03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      117488678 (thoc1) Spliceosome [BR:tben03041]  Complex C   Other components    EJC/TREX     117488678 (thoc1)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     117488678 (thoc1) BRITE hierarchy Motif Pfam:  efThoc1 Death Motif Other DBs NCBI-GeneID:  117488678 NCBI-ProteinID:  XP_033993596 EnsemblRapid:  ENSTBNG00005023034 LinkDB All DBs Position Unknown AA seq 665 aa AA seqDB search MFSGTSGCNGVKMSPSLFNFVDAKDKFTASARNALIGKTSKPLVNAFNQFPGHEAEKKTT FDQALRGVLGDQIVEQKANCDEYLSLIYLSIDAVTEGICSATTPFLLLGDVLDCLPLDQC DRIFSFVEKNVSTWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPL SEKSGLNLQSQFNLENITVFNKNEQESTLGLKHTEEKEDGMEVEEGEMGEDDAPAPCSIP IDYNLYRKFWTLQDYFRNPVQCYDKFSWMTFLKFSEETLAVFKSFKLDDMQASKRKLEEL RASGEDVYFAKFLTNEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLHDDQ SAWIEETTKLVYQLLKEIPPDGDKFATMVEHILNTEENWNGWKNEGCPSFVKERTVDDKP KRPTRKRQAPEDFLGKGPDAKIFMGNDELTRLWNLHHDNMDACKSDSREFMPSLDEFFTE AIEQADPTNMVEDEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKL AKELPKDIPSEEIKTGEEDDDDNGDNLLKDSNDSPSIQSKMVTNQQMDDLAAKLGAEWKA LASHLEMKAAEMREIETDSEDVDMQAKLLLVAWQDREGAQATVESLVAALNSAGFSQIAD CLNEA NT seq 1998 nt NT seq  +upstreamnt  +downstreamnt atgttcagtggcacttccggttgcaacggtgtaaagatgtcgccgtccttatttaatttt gtggacgctaaagacaaatttacggcgtctgccagaaatgcactaattggtaaaactagc aaacctttggtaaatgctttcaaccagtttcctggacatgaggcagaaaagaagactaca tttgaccaggcgctgagaggggttcttggtgatcagattgttgagcagaaggccaactgt gatgaatacctgtctctgatctacttgagtattgatgcagttacagaaggcatctgttct gctacaactcctttccttctgctgggagacgtgctggactgtcttcctctcgaccaatgt gacagaatcttttcttttgttgagaagaatgtttccacctggaaatcgaactccttctac actgctgggaagaactacttgctgaggatgtgtaacgatcttttaagaaggctgtccaaa tcccagaataccgtcttctgtggacgaatccagcttttcctggcacgtctcttccctctg tcggaaaaatcaggtctcaatctgcagagtcagtttaatctggaaaatataacagtgttc aacaaaaatgaacaagaaagcactctcggcctgaagcacacagaagaaaaggaagatggc atggaggtggaggaaggagaaatgggagaggatgatgctcctgcaccatgctccattcct attgactacaacttgtacagaaagttctggaccctgcaggactacttcagaaaccctgtg cagtgttacgataaattctcctggatgacattccttaagttctccgaagagacattggcc gtgttcaagagctttaagttggatgacatgcaggcctctaagagaaagctggaggagctg agggcatctggagaagacgtctacttcgccaagtttctaaccaatgagaagctgatggac ttgcagctcagcgacagtaacttcaggcggcacatcctgctgcagtacctcatcctcttc cagtacctgaagggtcaggtcaagttcaagagctccagctgtgttctgcatgatgaccag agcgcgtggattgaggagacgactaaactggtttatcagctgctgaaagagatccctcct gatggagacaagtttgccaccatggtggagcatatcctcaacacagaggagaactggaat ggctggaaaaatgagggctgcccgagctttgtgaaagaaaggacagtagatgacaaaccc aaaagacccacgaggaaaagacaagccccagaagacttcctcgggaaagggccggacgcc aaaatatttatgggaaatgatgagttgactcggctgtggaacctgcaccacgacaacatg gatgcctgcaagtcagacagcagggagttcatgccatcattggacgaattctttacggag gctattgaacaggccgaccctactaacatggtggaggatgagtataaggtcgtgaggaac ccaaactacggctggcgcgctctgaggctgctgtccaggagaagtcctcacttctttcaa ccgaccaatcagaagttcaagagcctggcagactacctcgacagcatggtcagcaagctg gccaaagaactgccgaaggatattccctctgaagagatcaagacaggagaagaggacgat gacgataacggagacaacctcctcaaagacagcaatgacagtccgagcatacagagcaag atggtgaccaaccagcagatggatgacttggcagccaaactgggcgcagagtggaaggct ctggcgtctcatctggagatgaaggcggcggagatgcgtgagatcgagacagatagtgaa gatgttgacatgcaggccaagctgctgctggtagcctggcaggaccgagagggagcacaa gctactgtggagagcctggtggcagctctgaactctgcagggttctcccagatcgctgac tgcctcaatgaggcttaa

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