Trematomus bernacchii (emerald rockcod): 117488718
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Entry
117488718 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117488718
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117488718
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-Nse
U-box
MRP-S31
RSS_P20
FliD_C
Motif
Other DBs
NCBI-GeneID:
117488718
NCBI-ProteinID:
XP_033993664
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAQKGVQLDRQTFSCPICLDLLKDPVTTSCGHSYCMKCITGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGPPPAPADHCSAGAEDVACDVCTGRKLRACKSCLVCL
ASYCDQHLQPHYESPVFKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQCICSLCSVDK
HKGHDTVSAAAERTERQRELEGSRQNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQKVRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLHGYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPT
EVDVLLSAAEPTTRAGFLQYSQEITLDPNTAYTRLVLSEGSRKATHMEQHQSYSSHPDRF
THYHQVLSRESLTGRCYWEVEWRGTGVCVAVAYKNISRAGSGNECGFGLNDKSWSLDCKQ
NSYSFRYNCIITPVSGPQSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHAGV
RLYSSYGATAEFCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccggcaaaccttctcttgtcccatctgtctggat
ctactgaaggatccggtgaccacttcctgtggacacagctactgcatgaagtgtattaca
ggcttctgggacggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggacccccacctgctcctgctgatcactgctctgctggagctgaagatgtg
gcctgtgatgtctgcactgggagaaagctgagagcctgtaagtcctgcctcgtgtgtctg
gcctcttactgtgaccaacaccttcagcctcattatgaatcacctgtctttaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagctgttctgccgcactgatcagcagtgtatctgttccctctgctctgtggacaaa
cacaaaggccatgacacagtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagcagagaatccaggacggagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagaag
gtcagatcccagcagaagagggaagtgagtcgagtcaaagagctccaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacggctacccctcactgtcagccctcagtgaacctacacac
tcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggatgttttactgtcagcagccgagcccaccaccagagctgggttcttacaatat
tcacaggaaatcacactggatccaaacacagcatacacacggctggtattatctgagggg
agcagaaaagcaacacacatggaacaacatcagtcttattctagtcacccagacagattc
actcattatcatcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagagggacaggagtttgtgtagcagtcgcatacaagaatatcagcagagcaggg
agtgggaatgaatgtggatttggactcaatgacaaatcttggtccttagattgtaaacaa
aacagttattcatttcgttacaactgtatcatcactcccgtctcaggtcctcagtcctcc
agagtaggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcagccgctacatgctggagtt
cggctttattctagttatggagccactgctgagttttgtaaactcaaatag
DBGET
integrated database retrieval system
