Trematomus bernacchii (emerald rockcod): 117490369
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Entry
117490369 CDS
T09643
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117490369 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117490369 (pom121)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117490369 (pom121)
BRITE hierarchy
Motif
Pfam:
POM121
DUF454
Motif
Other DBs
NCBI-GeneID:
117490369
NCBI-ProteinID:
XP_033995978
EnsemblRapid:
ENSTBNG00005001049
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MKVLRRRAAAMSPREKHIAIISVLGVVSLALYYIPNFLWVTLFLSVCCIVCYYQSGEPLP
ARLGLNPRARLRVPAVLRRWFWGWVSTGVSVAARGKTKSGRNKTEHRSFEGHFRERPVET
GIYRRDTLHTESFLFSPRDFLMGSYIGKPESPTADSGRPRAGRNPREQLRERLARPNHAV
YTPNRRLSFAGEPPATAGRFTITPQRHYPLQQPGVSQVGVLPPVKWDSFRKKNILSPRNC
SAVLSPVTIKIARPDHLSSPSFDHLSCAGLPRAPVDPCSRESVLKVLKESRKRVVEEEDG
SFTAEQKSKRRRNDSNGSAQSAFEPLLPNGTPSLLVPKPGSLKRGMTSLAEDALMKRSRT
SSISSGSGVHTPRGTPGSRRNPIQSSYSSSKGLSQWKKRSAPSSPLSSPGSSRSQTPEAA
SKRAKEDDGQSPSSASSVRSEKTASEKVPVTSKCTPALKLPVTPSAESTGSGGKRKRKIQ
LVSSHRDDQISLPPPPELGYTITVKDLDEEKKAALSKIQKVLETPAPEPEKSVAPAVSTS
LHPASSSSITTLSSLLASPLPTASSTLSNTPVINLDPSVSVSSAPAASNPLLEALKMKII
IPASSTSAANTTTVSASSTPVQSSGFTLNVSTAGVAPPASTSTSSSTGVDQPSAFTQVLS
QVSKPSISVAAVAGPTLFGLSSLISIAAASSASNPVSAAAPSPASSLASLSNTNPLLASG
FKPIFSVTTTTTPTAASTPESKPPVQSFKPIFGAATSSAGFGLPPPYTTSNSAATASPSI
TSSMFGGSTSSTTVTPSVFPGLTITNTPSSTGSIAATQPAAPAAVKSLFGNWSAPTTTST
SSASAQAPNTGSSFQFGAATTTAAAAPVLTAAATTTSSGGNFAFGATQADPQAANQKAFS
FGQAAPSQNTTTSSFGGFSMATTASSTTAATTTQSTFSFGKPSFQAPAAQATFGSSAAPA
AQNTFGSSAAPAAQATFGSSAAPAAQNTFGSSAAPAAQNTFGSSAAPAAQNTFGSSAAPA
AQNTFGSSAAQTAPTTFGSSTAAQATFGSSAAAQTTFGSSVAAPNSFNFGGGASSTPAPN
TAPPSFPFGSTAATTAASFGTPAKPAFGSSSTGFAFGGTAAPSAAPSAAPSFGSAAQTQS
SSSSNFSFGNAAPQQAAPGPAQPASGGFNFGAAMPCPQFGTPAPSNPAPQMGGFNFGAAA
TDKPAFGTSNPSFGQSAPAAAGPIPFGSPATPVQGFNSVPFGSPAAPSFSIGAGSKPIGA
RQRLQARRQHNRKK
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctccggcggcgcgctgccgccatgtcaccgagagagaaacatatagctatt
atctctgttttaggcgtagttagtcttgctctttattatattcccaattttctttgggtg
actttatttctttcagtgtgttgtattgtgtgttactatcaaagcggagaaccgcttccc
gccaggttaggcctcaatcctcgggctcgcctgagagttccagccgtgctccggcgctgg
ttttggggctgggtatcaaccggcgtgtcggtggccgctcgggggaaaacgaagagcggc
agaaacaaaactgagcaccggtcctttgagggacacttcagagaaaggcccgttgaaact
gggatttataggagggatactttgcacactgagtcgtttcttttcagtcctcgggatttc
ctcatggggagttacatcggaaaacccgaaagtccaactgccgactccgggaggccaaga
gccgggagaaacccccgagagcagctccgtgagagactggccagacccaaccatgctgtc
tacacgccgaacaggaggctctcatttgccggggagccgccggccacagcgggcagattc
accatcaccccccagcgtcattaccccctgcagcagcccggggtctcacaagtgggagtc
ctacctcctgtgaagtgggacagcttcaggaagaaaaacatcctcagccctcgtaactgt
tctgctgtcctcagccccgtcaccatcaagatcgccaggccggaccacctcagctccccc
agttttgaccatctgagttgtgcggggctccccagggcgcctgtggacccctgctccaga
gaaagtgtcctcaaggttttgaaggaaagccgcaagagagtagttgaggaggaggacgga
agcttcacagccgagcagaaaagcaaaagaaggcgtaatgacagcaatggaagcgcacaa
tctgcgtttgagcctctcctgcccaacgggacaccatcactgctggtccctaagcctgga
agcctgaaaagagggatgacctcccttgcagaggatgccctcatgaagagatctcgcacc
tcctccatcagctccggcagcggggtccacacccccagaggaacccccggcagcaggaga
aaccctatccagagctcctacagctcttcaaagggcctcagccagtggaagaagcggtca
gcacccagctcccctctctccagccccgggtcatctcgctctcagaccccagaggcagcc
tccaaaagagccaaggaggacgacggacagtctcccagctcagcatcctcagtgaggtca
gagaagacggcctctgagaaggttcctgttacatctaaatgtactccagctctcaagctg
ccagtcaccccctcagcagagtctactgggagtggtgggaagaggaagcgtaagatccag
ctggtgtcgagccaccgggacgatcagatctctctgcctccacctccagagctgggctac
accatcactgtgaaggacctggatgaggagaagaaggctgcgctcagcaaaatccagaag
gtgctggagacccctgctccagagccagagaagtctgtcgcccccgcagtctccacttcc
ctccatcctgcctcctccagcagcatcaccaccctgagcagcctcctggcttctcctctg
cccaccgcctcctcaacactctcaaacacccccgtcatcaacctggaccccagcgtcagt
gtgagctccgccccggcagcatccaacccgctgctggaggctctgaagatgaagatcatc
attcctgcgagctccacctctgctgccaacacaactacagtgtctgcatcctccacgccg
gtgcagtccagtggtttcaccctgaatgtttccactgcaggagtcgcccctcctgcctcc
acctctacatcctcctctacaggtgtggatcagccctcagccttcacccaggtgctgagt
caggtctccaagccctccatcagtgttgctgctgtagcaggaccaaccctgtttggactg
agcagtctgatcagcatcgctgctgcttcttccgcctccaacccggtctctgctgctgcc
ccttcccccgccagcagcttagcttcactcagtaacaccaaccctctgctggcttcaggg
ttcaaacccattttttccgtcaccaccaccaccacccccacagctgcatcaaccccggag
agcaaacctcctgtccaaagtttcaagcccatctttggagctgctacttcaagtgctgga
ttcggactgcctccaccctacaccacctctaactcagccgccaccgcttctcccagtatc
acatcatcaatgtttggtggatccactagcagcaccacagttaccccgtctgttttccct
ggtttaaccatcaccaacaccccctcctccaccggctccatcgctgccacgcagcccgca
gccccagcagctgtgaaatccctctttggaaactggtcagcaccaacaacaacctccacc
agctcagcctcagcgcaggcgcctaacaccgggagctcatttcagtttggagccgcgacc
actactgctgctgctgctcctgtcctgaccgctgctgccaccaccacctccagcgggggc
aacttcgcctttggtgccacacaggcagaccctcaggcagccaaccagaaggcattctcc
ttcggtcaggccgctcccagccagaacacaaccacatcttcatttggaggcttttcaatg
gccaccacggcctcctccaccactgctgccaccaccacccagtccaccttcagctttggg
aagccgtcctttcaagcaccggcagcacaggccacatttggctcctcggcggcaccggca
gcacagaacacatttggctcctctgcggcaccggcagcacaggccacatttggctcctcg
gcggcaccggctgcacagaacacatttggctcctcggcagcaccggcagcacagaacaca
tttggctcctcggcggcaccggcagcacagaacacatttggctcctcggcggcaccggca
gcacagaacacatttggttcttcagcggcacaaacggcaccgaccacgtttggttcttca
acggcagcacaggccacatttggttcttcagcggcagcacagaccacctttggctcctcg
gtggcagcgcctaactctttcaacttcggtggaggagcatcatccaccccagcccctaac
accgccccaccctctttcccctttgggtcgactgccgccacaacagctgccagttttggg
acgcctgctaaaccagcgtttggaagcagctccactgggtttgctttcggcggcaccgct
gctccctctgctgccccctcggctgctccgagcttcggttcagccgcacagactcagagc
tcctcctcctccaacttctcttttggaaatgcggctcctcagcaggcggcgcccggtccg
gctcagcctgcatccggtggatttaacttcggagctgcgatgccatgcccccagtttgga
acaccagcccccagtaaccctgcaccacagatgggaggcttcaatttcggggctgctgct
actgacaaaccagcttttggaacgtctaacccatccttcggtcagagtgctcccgccgct
gcaggtccgattccctttggaagtcctgcaactccagtccaaggcttcaactctgttcct
ttcgggtccccagccgctccctccttctccatcggagccggatcaaagccaattggagct
cgtcagaggcttcaggcgcggaggcagcacaacaggaagaagtaa
DBGET
integrated database retrieval system
