Trematomus bernacchii (emerald rockcod): 117490394
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Entry
117490394 CDS
T09643
Name
(RefSeq) serine/arginine-rich splicing factor 1-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117490394
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117490394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117490394
Spliceosome [BR:
tben03041
]
Common components
Common spliceosomal components
SR proteins
117490394
BRITE hierarchy
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
DDE_Tnp_1
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
117490394
NCBI-ProteinID:
XP_033996019
EnsemblRapid:
ENSTBNG00005008746
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
MSGGGIVRGPAGSNDCRIYVGNLPPDIRSKDVEDLFYKYGAIRDIDLKNRRGGPPFAFVQ
FEDARDSEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGRGGGGGGGGGGGGGDG
GPMGGQRRNHGPPSRRSEYRVLVSGLPTSGSWQDLKDHMREAGDVCYADVYRDGTGVVEF
VRKEDMSYAVRHLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSKSG
SRRSRGSPRYSPRHSPRHSPRRSRSRT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggaggaatcgttagaggacctgcagggagcaacgactgtcggatatacgtt
gggaatctcccccccgacatacggtcaaaggacgtcgaagacttgttttacaaatatgga
gccattcgtgatatcgatctgaaaaaccggagaggaggaccgccgtttgccttcgtgcag
tttgaggacgcgagggattctgaggatgctgtgtacggacgtgatggatatgactacgat
ggctaccgcctgcgtgttgagtttcctagaagtggacggggagggggaggaggaggagga
ggtggcggcggtcgtggtggtggtggtggtggtggaggaggaggaggtggaggtgatggt
ggacctatgggaggccagagacgaaaccatggtcctccttcccgacgctcggagtacagg
gttcttgtgtcaggtcttcctaccagtggaagctggcaggacctgaaggatcacatgcgg
gaggcaggtgatgtatgttatgctgatgtgtaccgtgatggcaccggggtagtggagttt
gtgcgcaaagaagacatgagctacgctgtccgtcatttggataacaccaagtttcgttct
catgagggagagactgcctacatccgtgtgaaggtggacggtccacgcagccccagctat
ggtcgttctcgctctcgtagccgctctcgtagccgcagtcgtagccgaagcaagagcggg
tcccgtcgcagcagaggatcgccccgttactcccctcgtcattcccctcgccactcccct
cgtcgttcccgctcccgcacctag
DBGET
integrated database retrieval system
